RNA–Protein interactions for RNA: ENSMUST00000051442.6

Pcdhb16-201, Transcript of MCG141291, mousemouse

APPRIS P1 BASIC

Gene Pcdhb16, Length 5,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb16-201ENSMUST00000051442 Krt23Q99PS0 422 aa14.01□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Zkscan7E9PVW1 718 aa14.01□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Pafah1b1P63005 410 aaKnown RBP14.01□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Terf1P70371 421 aa14.01□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 ItpripQ3TNL8 555 aa14.01□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Ttc12Q8BW49 704 aa14.01□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Ankrd1Q9CR42 319 aa14.01□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Knop1Q9Z2Q2 478 aaKnown RBP14.01□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Plch2A2AP18 1501 aa14.01□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Dnm1P39053 867 aa14□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Tacc1Q6Y685 774 aa14□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Pprc1Q6NZN1 1644 aa14□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Bin1O08539 588 aaKnown RBP14□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Hvcn1Q3U2S8 269 aa14□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Tsg101Q61187 391 aa14□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Ifit2Q64112 472 aa14□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Pdzd9Q9D9M4 266 aa14□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Cops6O88545 324 aa14□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Sdc2P43407 202 aa14□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Fam170aQ66LM6 333 aa14□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Glg1Q61543 1175 aaKnown RBP13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Otud6bQ8K2H2 294 aa13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Mrpl12Q9DB15 201 aaKnown RBP13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 CenphQ9QYM8 241 aa13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Usp5P56399 858 aaKnown RBP13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Ufl1Q8CCJ3 793 aaKnown RBP13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Kdm6bQ5NCY0 1641 aa13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Plekhg1F6S200 1446 aa13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Snrpa1P57784 255 aaKnown RBP13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 TxlnbQ8VBT1 685 aa13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Prl3d3A0A0M6L0J6 224 aa13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Lrrc43Q3V0L5 667 aa13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Atg3Q9CPX6 314 aa13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Sil1Q9EPK6 465 aa13.99□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Zscan29E9Q5B4 869 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Gm12185Q5NCB2 835 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Esco1Q69Z69 843 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 RtcbQ99LF4 505 aaKnown RBP13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Rlbp1Q9Z275 317 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 NmiO35309 314 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Dapk3O54784 448 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 IntuQ059U7 942 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Nol7Q9D7Z3 254 aaKnown RBP13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Kdm6aO70546 1401 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Erbb3Q61526 1339 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 F2rP30558 430 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Pdzrn3Q69ZS0 1063 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Tti2Q8BGV4 512 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Cyp2ab1S4R196 498 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Gnat2P50149 354 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Larp6Q8BN59 492 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Znf131Q8K3J5 619 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Hs2st1Q8R3H7 356 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Ssr1Q9CY50 286 aaKnown RBP13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Ktn1Q61595 1327 aaKnown RBP13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Adcy5P84309 1262 aa13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Abcf1Q6P542 837 aaKnown RBP13.98□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Casp1P29452 402 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Q4VA45 678 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Vps54Q5SPW0 977 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Cdca7Q9D0M2 382 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Eya2O08575 532 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Kifc2O08672 792 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Ncf1Q09014 390 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Tbc1d5Q80XQ2 815 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Cdca8Q8BHX3 289 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Ttc14Q9CSP9 761 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Baiap2l1Q9DBJ3 514 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Ccdc112A0AUP1 442 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Tm6sf1P58749 370 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Erlin2Q8BFZ9 340 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Lrrfip2Q91WK0 415 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Prl3d2F6R3P9 224 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Jdp2P97875 163 aa13.97□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Cnksr1A2A9K7 700 aa13.96□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Syt1P46096 421 aa13.96□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Morc2aQ69ZX6 1030 aa13.96□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Themis2Q91YX0 663 aa13.96□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Smtnl1Q99LM3 459 aa13.96□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Sult6b1P0CC03 303 aa13.96□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Eif4a1P60843 406 aaKnown RBP13.96□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Pram1Q6BCL1 675 aa13.96□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Vps16Q920Q4 839 aa13.96□□□□□ -0.17
Pcdhb16-201ENSMUST00000051442 Pla2g4fQ50L41 855 aa13.96□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Secisbp2lQ6A098 1086 aaKnown RBP13.96□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Zkscan8Q8BSL0 588 aa13.96□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Olr1Q9EQ09 363 aa13.96□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Homer1Q9Z2Y3 366 aa13.96□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Eif2ak4Q9QZ05 1648 aa13.96□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Cacna2d4Q5RJF7 1116 aa13.96□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Itga6Q61739 1091 aa13.96□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Ift57Q8BXG3 429 aa13.96□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 LratQ9JI60 231 aa13.96□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Atp10aO54827 1508 aa13.95□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Rufy3Q9D394 469 aa13.95□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Cwc15Q9JHS9 229 aaKnown RBP13.95□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Qtrt2B8ZXI1 415 aa13.95□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Cbx1P83917 185 aaKnown RBP13.95□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Cnga2Q62398 664 aa13.95□□□□□ -0.18
Pcdhb16-201ENSMUST00000051442 Irs4Q9Z0Y7 1216 aa13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms