RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Timm10P62073 90 aa13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Foxp4Q9DBY0 795 aaKnown RBP13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Trim30cD3YVI9 513 aa13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Zfp317Q8C0Q5 607 aa13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Erc1Q99MI1 1120 aa13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Pus3Q9JI38 481 aa13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Eef2kO08796 724 aa13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Prl7a2O54831 253 aa13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Fsd2Q8BZ52 692 aa13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Gm32742A0A1B0GT42 1604 aa13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Lcmt1A0A0U1RNF2 332 aa13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Diaph1O08808 1255 aa13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Ccdc12Q8R344 166 aaKnown RBP13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Fam50bQ9WTJ8 334 aa13.13□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Ktn1Q61595 1327 aaKnown RBP13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Arglu1Q3UL36 271 aaKnown RBP13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 GckrQ91X44 587 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Adgrl1Q80TR1 1466 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Eif3aP23116 1344 aaKnown RBP13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Gm42641I6L9G2 585 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Kif2aP28740 705 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 AtripQ8BMG1 785 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Pabpn1Q8CCS6 302 aaKnown RBP13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Uggt1Q6P5E4 1551 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Ranbp1P34022 203 aaKnown RBP13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Ctdnep1Q3TP92 244 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Ccdc34Q3UI66 367 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Atp1a2Q6PIE5 1020 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Ptcd1Q8C2E4 695 aaKnown RBP13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 AidaQ8C4Q6 305 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Nlgn1Q99K10 843 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 GmnnO88513 206 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Map9Q3TRR0 646 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Nxf7Q80SZ6 620 aaKnown RBP13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Ttc19Q8CC21 365 aa13.12□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Q66JV7 365 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Hmg20bQ9Z104 317 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Atp12aQ9Z1W8 1035 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Cdc45Q9Z1X9 566 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Hspa2P17156 633 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Igflr1Q3U4N7 345 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Gm21985Q6P6P5 1106 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Trak2Q6P9N8 913 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Bend3Q6PAL0 825 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Rbm17Q8JZX4 405 aaKnown RBP13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Abl1P00520 1123 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Sptlc2P97363 560 aaKnown RBP13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 RbsnQ80Y56 783 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Tbc1d4Q8BYJ6 1307 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Plxnc1Q9QZC2 1574 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Hoxa7P02830 229 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Hspa4Q61316 841 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Smc4Q8CG47 1286 aa13.11□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Aox1O54754 1333 aa13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 ShprhQ7TPQ3 1674 aa13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 SdsQ8VBT2 327 aa13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Gcom1E9PZ54 550 aa13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Dnm1P39053 867 aa13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 MyzapQ3UIJ9 466 aa13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Ube2oQ6ZPJ3 1288 aa13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Cwc15Q9JHS9 229 aaKnown RBP13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 DonsonQ9QXP4 560 aa13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Atp7bQ64446 1462 aa13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Rbm28Q8CGC6 750 aaKnown RBP13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Acot9Q9R0X4 439 aaKnown RBP13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Necab1Q8BG18 352 aa13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Cep55Q8BT07 462 aa13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Col4a3bpQ9EQG9 624 aa13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 TefQ9JLC6 301 aa13.1□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Gm21969J3QJZ1 289 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Dnm3Q8BZ98 863 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Klhl30Q8C3F7 581 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Lrrc2Q8VDB8 371 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Fkbp5Q64378 456 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Hps3Q91VB4 1002 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Abcb6Q9DC29 842 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Atf5O70191 283 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Rtel1Q0VGM9 1203 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Acnat2Q8BGG9 420 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Cdca8Q8BHX3 289 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Nat10Q8K224 1024 aaKnown RBP13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Arl8aQ8VEH3 186 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Zcchc17Q9ESX4 241 aaKnown RBP13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Add2Q9QYB8 725 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Nos1Q9Z0J4 1429 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Idi1P58044 227 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Vps16Q920Q4 839 aa13.09□□□□□ -0.31
Topbp1-201ENSMUST00000035164 CrcpO35427 148 aa13.08□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Golph3lQ8R088 285 aaKnown RBP13.08□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Fam84aQ9D650 292 aa13.08□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Magi2Q9WVQ1 1275 aa13.08□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Abcc3B2RX12 1523 aa13.08□□□□□ -0.31
Topbp1-201ENSMUST00000035164 Jakmip3Q5DTN8 844 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Rnf187Q8BFX1 236 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Mei4Q8BRM6 389 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Nek11Q8C0Q4 628 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Desi2Q9D291 194 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Robo2Q7TPD3 1470 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 1700006A11RikB9EHI3 544 aa13.08□□□□□ -0.32
Topbp1-201ENSMUST00000035164 Eif4a1P60843 406 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms