RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Znf496Q5SXI5 585 aa14.32□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Eif4g2Q62448 906 aaKnown RBP14.32□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Best3Q6H1V1 669 aa14.32□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Myo3bQ1EG27 1305 aa14.32□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Ankrd44B2RXR6 993 aa14.31□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Ube4aE9Q735 1028 aa14.31□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Anxa1P10107 346 aaKnown RBP14.31□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Snrpa1P57784 255 aaKnown RBP14.31□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Yy1Q00899 414 aa14.31□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Eif5bQ05D44 1216 aaKnown RBP14.31□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 NexnQ7TPW1 607 aa14.31□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Tbc1d8Q9Z1A9 1134 aa14.31□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Gdf11Q9Z1W4 405 aa14.31□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Eif3aP23116 1344 aaKnown RBP14.31□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Nup188Q6ZQH8 1759 aa14.31□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Bin2D3Z6Q9 489 aa14.3□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 1700029H14RikE9PY36 240 aa14.3□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Gpr182P43142 395 aa14.3□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Atp6v1aP50516 617 aaKnown RBP14.3□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Thrap3Q569Z6 951 aaKnown RBP14.3□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Mum1Q6DID5 682 aa14.3□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Rwdd1Q9CQK7 243 aa14.3□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Slfn1Q9Z0I7 337 aa14.3□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Prl3d2F6R3P9 224 aa14.29□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Map3k9Q3U1V8 1077 aa14.29□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 MvpQ9EQK5 861 aa14.29□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Prkar2bP31324 416 aa14.28□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Bend4P86174 541 aa14.28□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Nol10Q5RJG1 687 aaKnown RBP14.28□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Smc4Q8CG47 1286 aa14.28□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Plekhg6Q8R0J1 787 aa14.28□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Ncoa5Q91W39 579 aaKnown RBP14.28□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Ly6iQ9WU67 134 aa14.28□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 Sh3bp5Q9Z131 463 aa14.28□□□□□ -0.12
Ccdc28b-201ENSMUST00000030586 IntuQ059U7 942 aa14.27□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Usp48Q3V0C5 1052 aa14.27□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Trim58Q5NCC9 485 aa14.27□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 LratQ9JI60 231 aa14.27□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Stk36Q69ZM6 1316 aa14.26□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Zc3h15Q3TIV5 426 aaKnown RBP14.26□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Dhx38Q80X98 1228 aa14.26□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Aldh1l2Q8K009 923 aa14.26□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Col3a1P08121 1464 aa14.25□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Btaf1E9QAE3 1848 aa14.25□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Nrxn2E9Q7X7 1710 aa14.25□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Pa2g4P50580 394 aaKnown RBP14.25□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Lrch1P62046 709 aa14.25□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Plekhf1Q3TB82 279 aa14.25□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Stk32bQ9JJX8 414 aa14.25□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 NpcdF8VQB8 469 aa14.24□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Gnai2P08752 355 aaKnown RBP14.24□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Il15P48346 162 aa14.24□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Ftl2P49945 183 aa14.24□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Atg9aQ68FE2 551 aa14.24□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Tmem143Q8VD26 458 aa14.24□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Sh3bp5lQ99LH9 392 aa14.24□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Kcnq5Q9JK45 933 aa14.24□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Dcdc2bF7BCK0 340 aa14.23□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Ier5O89113 308 aa14.23□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 VgfQ0VGU4 617 aa14.23□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Glis3Q6XP49 780 aa14.23□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Tspyl2Q7TQI8 677 aa14.23□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Rab3gap1Q80UJ7 981 aa14.23□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Rasgrp4Q8BTM9 673 aa14.23□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Glis2Q8VDL9 521 aa14.23□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Rbm33Q9CXK9 1231 aaKnown RBP14.23□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Col24a1Q30D77 1733 aa14.23□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Kiaa0232Q80U59 1396 aaKnown RBP14.22□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Ltn1Q6A009 1767 aa14.22□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Zfp646Q6NV66 1788 aa14.22□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Prl3d3A0A0M6L0J6 224 aa14.22□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Vsig10D3YX43 558 aa14.22□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Eddm13E9Q7F5 164 aa14.22□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Sult6b1P0CC03 303 aa14.22□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 AaasP58742 546 aa14.22□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Slc14a2Q8R4T9 930 aa14.22□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Tceal9Q9DD24 104 aa14.22□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Osbpl5Q9ER64 874 aa14.22□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Plekho1Q9JIY0 408 aa14.22□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Scn9aQ62205 1984 aa14.22□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Triml2E9PW10 424 aa14.21□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Psmd1Q3TXS7 953 aa14.21□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Ell2Q3UKU1 639 aa14.21□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Chmp3Q9CQ10 224 aa14.21□□□□□ -0.13
Ccdc28b-201ENSMUST00000030586 Eya2O08575 532 aa14.2□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 GabrdP22933 449 aa14.2□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Ets1P27577 440 aa14.2□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Casp1P29452 402 aa14.2□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Fgd1P52734 960 aa14.2□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Atp8b2P98199 1209 aa14.2□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Cwc27Q3TKY6 469 aa14.2□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Ccdc51Q3URS9 406 aa14.2□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Zkscan8Q8BSL0 588 aa14.2□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Fam122aQ9DB52 284 aa14.2□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Znf521Q6KAS7 1311 aa14.19□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Upf2A2AT37 1269 aaKnown RBP14.19□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 AppP12023 770 aa14.19□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Rhbdl3P58873 404 aa14.19□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Map9Q3TRR0 646 aa14.19□□□□□ -0.14
Ccdc28b-201ENSMUST00000030586 Slc4a10Q5DTL9 1118 aa14.19□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms