RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Atp10bB1AWN4 1474 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Clcn1Q64347 994 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Fsd1Q7TPM6 496 aa9.37□□□□□ -0.91
Lig3-201ENSMUST00000021039 Cep55Q8BT07 462 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Rec8Q8C5S7 591 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Disp3A3KFU9 1347 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Phlpp2Q8BXA7 1320 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Tpm1P58771 284 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Mre11Q61216 706 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Ccdc178Q8CDV0 866 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 RictorQ6QI06 1708 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Ppfia1B2RXQ2 1266 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 1700029H14RikE9PY36 240 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Mmp8O70138 465 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 AcrbpQ3V140 540 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Ddrgk1Q80WW9 315 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Amhr2Q8K592 568 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Rufy2Q8R4C2 606 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Ccdc39Q9D5Y1 937 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Col15a1O35206 1367 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Sema6bO54951 886 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 Wasf1Q8R5H6 559 aa9.36□□□□□ -0.91
Lig3-201ENSMUST00000021039 NaspQ99MD9 773 aaKnown RBP9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 SlkO54988 1233 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 CpvlQ9D3S9 478 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Mad1l1Q9WTX8 717 aaKnown RBP9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Topaz1E5FYH1 1653 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Tmem131lQ3U3D7 1597 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Ncf1Q09014 390 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Ift74Q8BKE9 600 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Med1Q925J9 1575 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Prr5lA2AVJ5 370 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Rab3gap1Q80UJ7 981 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Sh3bgrQ9WUZ7 214 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 DnmbpQ6TXD4 1580 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Kif13aQ9EQW7 1749 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Nap1l2P51860 460 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Rps8P62242 208 aaKnown RBP9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Fbxo41Q6NS60 873 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Bend3Q6PAL0 825 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Vps37dQ810I0 261 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Kif2cQ922S8 721 aa9.35□□□□□ -0.91
Lig3-201ENSMUST00000021039 Arid4aF8VPQ2 1261 aaKnown RBP9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Pcdhb5Q91XZ5 792 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Gnat2P50149 354 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 ParnQ8VDG3 624 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Bicd2Q921C5 820 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Hmg20bQ9Z104 317 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 PrkcshO08795 521 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Stk11ipQ3TAA7 1072 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Jarid2Q62315 1234 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Gpatch3Q8BIY1 525 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 TsksO54887 585 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Tm6sf1P58749 370 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Traf3ip1Q149C2 625 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Gtf2f1Q3THK3 508 aaKnown RBP9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Vars2Q3U2A8 1060 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Tnpo1Q8BFY9 898 aaKnown RBP9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Aox2Q5SGK3 1345 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Slc4a4O88343 1079 aa9.34□□□□□ -0.91
Lig3-201ENSMUST00000021039 Col14a1Q80X19 1797 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 PogkQ80TC5 607 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Cdc45Q9Z1X9 566 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Eif6O55135 245 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Il15P48346 162 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Fchsd1Q6PFY1 688 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Taok2Q6ZQ29 1240 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Palm3A2TJV2 734 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Ccdc34Q3UI66 367 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Cep57l1Q8VDS7 400 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Nrxn1Q9CS84 1514 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Plbd2Q3TCN2 594 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Tbc1d9Q3UYK3 1264 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Drc7Q6V3W6 876 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Galntl5Q9D4M9 431 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Gabpb2P81069 414 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Gjb2Q00977 226 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Arid3aQ62431 601 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Hook1Q8BIL5 728 aa9.33□□□□□ -0.92
Lig3-201ENSMUST00000021039 Brd1E9PZ26 1189 aaKnown RBP9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Olfm5Q8BU90 496 aa9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Tfip11Q9ERA6 838 aaKnown RBP9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Adora1Q60612 326 aa9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Pram1Q6BCL1 675 aa9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 LratQ9JI60 231 aa9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Znf428Q8C1M2 176 aa9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Atf7Q8R0S1 413 aa9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Adarb2Q9JI20 745 aa9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Dennd3A2RT67 1274 aa9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Slc27a3O88561 667 aa9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Gtpbp6Q3U6U5 514 aa9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Tom1l2Q5SRX1 507 aa9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Zkscan1Q8BGS3 561 aaKnown RBP9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Ccdc43Q9CR29 222 aaKnown RBP9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Ehd4Q9EQP2 541 aa9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 TnksQ6PFX9 1320 aa9.32□□□□□ -0.92
Lig3-201ENSMUST00000021039 Slc1a4O35874 532 aa9.31□□□□□ -0.92
Lig3-201ENSMUST00000021039 Timm10P62073 90 aa9.31□□□□□ -0.92
Lig3-201ENSMUST00000021039 Dok7Q18PE0 504 aa9.31□□□□□ -0.92
Lig3-201ENSMUST00000021039 AbraQ8BUZ1 375 aa9.31□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms