RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Washc1Q8VDD8 475 aa11.95□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Znf526Q8BI66 675 aa11.94□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Zbtb1Q91VL9 713 aa11.94□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Gigyf1Q99MR1 1044 aaKnown RBP11.94□□□□□ -0.5
Rnft1-201ENSMUST00000020827 TefQ9JLC6 301 aa11.94□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Sult6b1P0CC03 303 aa11.94□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Kif20aP97329 887 aa11.94□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Chmp3Q9CQ10 224 aa11.94□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Myh1Q5SX40 1942 aa11.94□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Eef2kO08796 724 aa11.94□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Slit1Q80TR4 1531 aa11.93□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Myl10Q62082 202 aa11.93□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Taok2Q6ZQ29 1240 aa11.93□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Zscan22Q8BGS5 496 aa11.93□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Pcdhb15Q91Y04 786 aa11.93□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Rbm10Q99KG3 930 aaKnown RBP11.93□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Znf638Q61464 1960 aaKnown RBP11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Gpr182P43142 395 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Psrc1Q9D0P7 329 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Ripk4Q9ERK0 786 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Pramel3A2AHA7 463 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Gm7903A2AWL1 463 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 AV320801A2AWL3 467 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Vmn2r23E9PXI5 849 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Gm15023L7MUB4 467 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 PtmaP26350 111 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Atp1a3Q6PIC6 1013 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Nrbp1Q99J45 535 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Bcl2l12Q9D3J3 255 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Prdm1Q60636 856 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Snx13Q6PHS6 957 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Ehd2Q8BH64 543 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Arid5bQ8BM75 1188 aaKnown RBP11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Unc13bQ9Z1N9 1602 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Cdhr2E9Q7P9 1308 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Dnajc5P60904 198 aa11.92□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Tiam2Q6ZPF3 1715 aa11.91□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Lins1Q3U1D0 764 aa11.91□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Lmod1Q8BVA4 595 aa11.91□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Zfp317Q8C0Q5 607 aa11.91□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Irf5P56477 497 aa11.91□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Miga2Q8BK03 593 aa11.91□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Ccdc9Q8VC31 543 aaKnown RBP11.91□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Cep350E9Q309 3095 aa11.91□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Myd88P22366 296 aa11.91□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Serpina10Q8R121 448 aa11.91□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Efcc1Q9JJF6 558 aa11.91□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Rcan3Q9JKK0 239 aa11.91□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Cnnm3Q32NY4 713 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Olfml1Q8BSH2 233 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Q9D9S1 216 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Trip6Q9Z1Y4 480 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 FanccP50652 591 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 CgnP59242 1191 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Glis3Q6XP49 780 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 AnlnQ8K298 1121 aaKnown RBP11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Tktl2Q9D4D4 627 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Pard3Q99NH2 1333 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Cyp2c23E9Q5K4 494 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Gzf1Q4VBD9 706 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Tmem59lQ7TNI2 337 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Sec62Q8BU14 398 aaKnown RBP11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Tmc2Q8R4P4 888 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Hps3Q91VB4 1002 aa11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Nip7Q9CXK8 180 aaKnown RBP11.9□□□□□ -0.5
Rnft1-201ENSMUST00000020827 Prss40A6H6T1 365 aa11.9□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Dctn1O08788 1281 aa11.9□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Sptlc3Q8BG54 563 aa11.9□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Zfp113Q8C689 439 aa11.9□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Myh2G3UW82 1942 aa11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 MecomP14404 1042 aa11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Anapc15P60007 132 aa11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Larp6Q8BN59 492 aa11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Lrrc2Q8VDB8 371 aa11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Sos2Q02384 1333 aa11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Hspd1P63038 573 aaKnown RBP11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Map10Q8BJS7 891 aa11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Rps6kb1Q8BSK8 525 aa11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Phf14Q9D4H9 881 aa11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Sil1Q9EPK6 465 aa11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 ImpactO55091 318 aa11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Smc3Q9CW03 1217 aaKnown RBP11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Spata31d1bE9QA57 1361 aa11.89□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Usp28Q5I043 1051 aa11.88□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Kcnf1Q7TSH7 493 aa11.88□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Krt24A1L317 512 aa11.88□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Clca2Q8BG22 942 aa11.88□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Usp44Q8C2S0 711 aa11.88□□□□□ -0.51
Rnft1-201ENSMUST00000020827 ApobrQ8VBT6 942 aa11.88□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Ssc5dQ8BV57 1371 aa11.88□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Rgs9O54828 675 aa11.88□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Krtap5-3Q9D226 196 aa11.88□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Gripap1Q8VD04 806 aa11.88□□□□□ -0.51
Rnft1-201ENSMUST00000020827 IcoslgQ9JHJ8 322 aa11.87□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Zfp51Q3U4L8 781 aa11.87□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Pram1Q6BCL1 675 aa11.87□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Ssfa2Q922B9 1252 aa11.87□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Wdr93Q402B2 695 aa11.87□□□□□ -0.51
Rnft1-201ENSMUST00000020827 Dcaf5Q80T85 946 aa11.87□□□□□ -0.51
Rnft1-201ENSMUST00000020827 St18Q80TY4 1045 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms