RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Cyp26c1B2RXA7 518 aa14.06□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Mrpl12Q9DB15 201 aaKnown RBP14.06□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Hoxa7P02830 229 aa14.06□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Foxp4Q9DBY0 795 aaKnown RBP14.06□□□□□ -0.16
Ctr9-201ENSMUST00000005749 KdrP35918 1367 aa14.06□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Becn1O88597 448 aa14.06□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Ppp1r9bQ6R891 817 aaKnown RBP14.06□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Aldh1l2Q8K009 923 aa14.06□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Lrrfip2Q91WK0 415 aa14.06□□□□□ -0.16
Ctr9-201ENSMUST00000005749 PdcQ9QW08 244 aa14.06□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Metap2O08663 478 aaKnown RBP14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Nucb1Q02819 459 aaKnown RBP14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Limch1Q3UH68 1057 aa14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Pim2Q62070 370 aa14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Tgfb1i1Q62219 461 aa14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 ParnQ8VDG3 624 aa14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Ncoa5Q91W39 579 aaKnown RBP14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Adgrb3Q80ZF8 1522 aa14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Myl10Q62082 202 aa14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Aldh8a1Q8BH00 487 aa14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Mrps25Q9D125 171 aaKnown RBP14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Olfml1Q8BSH2 233 aa14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Paf1Q8K2T8 535 aa14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Cep89Q9CZX2 791 aa14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Dip2cE9PWR4 1557 aa14.05□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Plekhg2Q6KAU7 1340 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Rad17Q6NXW6 688 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Usp19Q3UJD6 1360 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Ncapd2Q8K2Z4 1392 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 NppbP40753 121 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Mlh1Q9JK91 760 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 NhsB1AV60 1647 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Kiaa0319Q5SZV5 1081 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 SelenooQ9DBC0 667 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Dnm1P39053 867 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Chl1P70232 1209 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Map3k12Q60700 888 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Nlrp9aQ66X03 949 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 CenppQ9CZ92 286 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 WtapQ9ER69 396 aa14.04□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Rdm1Q9CQK3 281 aa14.03□□□□□ -0.16
Ctr9-201ENSMUST00000005749 TsksO54887 585 aa14.03□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Prdm1Q60636 856 aa14.03□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Tekt3Q6X6Z7 490 aa14.03□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Knl1Q66JQ7 1612 aa14.03□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Bin1O08539 588 aaKnown RBP14.03□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Zbtb40Q6PCS8 1258 aa14.03□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Abca8bQ8K440 1620 aa14.03□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Hmgb2P30681 210 aaKnown RBP14.02□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Stat1P42225 749 aa14.02□□□□□ -0.16
Ctr9-201ENSMUST00000005749 U2af1l4Q8BGJ9 220 aa14.02□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Pcdhb5Q91XZ5 792 aa14.02□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Stx6Q9JKK1 255 aa14.02□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Ak2Q9WTP6 239 aa14.02□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Med14A2ABV5 1459 aaKnown RBP14.02□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Eif6O55135 245 aa14.02□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Ftl2P49945 183 aa14.02□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Zbtb38Q3LR78 1197 aa14.02□□□□□ -0.16
Ctr9-201ENSMUST00000005749 Commd10Q8JZY2 202 aa14.02□□□□□ -0.16
Ctr9-201ENSMUST00000005749 1700029H14RikE9PY36 240 aa14.02□□□□□ -0.17
Ctr9-201ENSMUST00000005749 CoilQ5SU73 570 aa14.02□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Ifit2Q64112 472 aa14.02□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Gm21985Q6P6P5 1106 aa14.02□□□□□ -0.17
Ctr9-201ENSMUST00000005749 DlatQ8BMF4 642 aa14.02□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Wasf1Q8R5H6 559 aa14.02□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Abca6Q8K441 1624 aa14.02□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Arhgap23Q69ZH9 1483 aa14.02□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Terf2O35144 541 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Nap1l1P28656 391 aaKnown RBP14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Vps16Q920Q4 839 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Znf287Q9EQB9 759 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 TnrQ8BYI9 1358 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Rasa1E9PYG6 1038 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 LyarQ08288 388 aaKnown RBP14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Tbc1d32Q3URV1 1296 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Myom2Q14BI5 1463 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Bin2D3Z6Q9 489 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Myo1bP46735 1107 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Bend3Q6PAL0 825 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Ush1cQ9ES64 910 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Tmem2Q5FWI3 1383 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Catsper2A2ARP9 588 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Prl3d2F6R3P9 224 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Atf5O70191 283 aa14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Rps8P62242 208 aaKnown RBP14.01□□□□□ -0.17
Ctr9-201ENSMUST00000005749 2310002L09RikQ9D7L5 217 aa14□□□□□ -0.17
Ctr9-201ENSMUST00000005749 LlphQ9D945 130 aaKnown RBP14□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Prr29B1ARI9 187 aa14□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Prkg1P0C605 671 aa14□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Mdh1bQ5F204 500 aa14□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Znf219Q6IQX8 726 aa14□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Hmgn5Q9JL35 406 aa14□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Plxnc1Q9QZC2 1574 aa14□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Ccdc129Q14B48 1034 aa14□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Dis3l2Q8CI75 870 aaKnown RBP14□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Ttc14Q9CSP9 761 aa14□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Kdm2bQ6P1G2 1309 aa14□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Ccdc173A0JLY1 547 aa13.99□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Prr5lA2AVJ5 370 aa13.99□□□□□ -0.17
Ctr9-201ENSMUST00000005749 Traf3ip1Q149C2 625 aa13.99□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms