RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Ftsj3Q9DBE9 838 aaKnown RBP14.66□□□□□ -0.06
Msh6-201ENSMUST00000005503 Ktn1Q61595 1327 aaKnown RBP14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Znf568E9PYI1 671 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Eva1cP58659 440 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Abcf1Q6P542 837 aaKnown RBP14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Zswim4Q8C7B8 1101 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Vps53Q8CCB4 832 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Sil1Q9EPK6 465 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Disp3A3KFU9 1347 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Kif1bQ60575 1816 aaKnown RBP14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Cd22P35329 862 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Ccdc93Q7TQK5 629 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Pnpla2Q8BJ56 486 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Slc13a4Q8BZ82 625 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Elmsan1E9Q2I4 1089 aaKnown RBP14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Nek11Q8C0Q4 628 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Def6Q8C2K1 630 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 4930572O03RikQ8C5Y0 211 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 4930504O13RikQ8C5Z9 145 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Ccdc150Q8CDI7 1110 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Nlgn1Q99K10 843 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Ankrd1Q9CR42 319 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Amotl1Q9D4H4 968 aa14.65□□□□□ -0.06
Msh6-201ENSMUST00000005503 Dapk3O54784 448 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 NapbP28663 298 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 March6Q6ZQ89 909 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Klhl30Q8C3F7 581 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Rbm17Q8JZX4 405 aaKnown RBP14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Krt25Q8VCW2 446 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Atp8b3Q6UQ17 1335 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Trpm2Q91YD4 1506 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Hoxc9P09633 260 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Sh3bp1P55194 680 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 MpndQ3TV65 487 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Kank4Q6P9J5 1016 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Mknk2Q8CDB0 459 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Znf131Q8K3J5 619 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Rbm19Q8R3C6 952 aaKnown RBP14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Rbm33Q9CXK9 1231 aaKnown RBP14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Znf608Q56A10 1511 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Exoc8Q6PGF7 716 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Fam76aQ922G2 307 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Cfap45Q9D9U9 551 aa14.64□□□□□ -0.07
Msh6-201ENSMUST00000005503 Metap2O08663 478 aaKnown RBP14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Slc5a1Q8C3K6 665 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Smc1bQ920F6 1248 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Cdc42bpaQ3UU96 1719 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Tgfb1i1Q62219 461 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Prkab2Q6PAM0 271 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Dhx38Q80X98 1228 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Acot9Q9R0X4 439 aaKnown RBP14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Mx2Q9WVP9 655 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Mroh2aD3Z750 1679 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 GptQ8QZR5 496 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Dnajc25A2ALW5 357 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Psmb7P70195 277 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Ncbp1Q3UYV9 790 aaKnown RBP14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 TrhQ62361 256 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Pip4k2bQ80XI4 416 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Acnat2Q8BGG9 420 aa14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Eif3bQ8JZQ9 803 aaKnown RBP14.63□□□□□ -0.07
Msh6-201ENSMUST00000005503 Brpf3B2KF05 1204 aaKnown RBP14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 Arglu1Q3UL36 271 aaKnown RBP14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 Gm156Q58A37 223 aa14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 Sgsm2Q80U12 1005 aa14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 Clec11aO88200 328 aa14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 Pafah1b1P63005 410 aaKnown RBP14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 Nom1Q3UFM5 854 aaKnown RBP14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 Ccdc181Q80ZU5 509 aa14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 Osbpl5Q9ER64 874 aa14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 Nfe2l3Q9WTM4 660 aa14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 Ugt1a5B2RT14 529 aa14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 NmiO35309 314 aa14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 Lrrc2Q8VDB8 371 aa14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 Adamts13Q769J6 1426 aa14.62□□□□□ -0.07
Msh6-201ENSMUST00000005503 Ehmt1Q5DW34 1296 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 4930548H24RikQ9D496 437 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 Taf7Q9R1C0 341 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 Atp12aQ9Z1W8 1035 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 Spata31d1bE9QA57 1361 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 Necab1Q8BG18 352 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 Terf2ipQ91VL8 393 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 Prl7a2O54831 253 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 Fez2Q6TYB5 348 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 Cnot6lQ8VEG6 555 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 Setd1bQ8CFT2 1985 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 NpatQ8BMA5 1420 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 Gm3409A0A0G2JE67 319 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 Ift122Q6NWV3 1182 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 SympkQ80X82 1284 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 Sel1lQ9Z2G6 790 aa14.61□□□□□ -0.07
Msh6-201ENSMUST00000005503 Trim55G3X8Y1 545 aa14.6□□□□□ -0.07
Msh6-201ENSMUST00000005503 Astn2Q80Z10 1352 aa14.6□□□□□ -0.07
Msh6-201ENSMUST00000005503 Wdr3Q8BHB4 942 aaKnown RBP14.6□□□□□ -0.07
Msh6-201ENSMUST00000005503 Lmod1Q8BVA4 595 aa14.6□□□□□ -0.07
Msh6-201ENSMUST00000005503 SdsQ8VBT2 327 aa14.6□□□□□ -0.07
Msh6-201ENSMUST00000005503 Trim34bJ3QNR8 485 aa14.6□□□□□ -0.07
Msh6-201ENSMUST00000005503 Idi1P58044 227 aa14.6□□□□□ -0.07
Msh6-201ENSMUST00000005503 Hdgfl1Q2VPR5 283 aa14.6□□□□□ -0.07
Msh6-201ENSMUST00000005503 Talpid3E9PV87 1520 aa14.6□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms