RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SLC25A16P16260 332 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 ZNF16P17020 682 aaPredicted RBP12.96□□□□□ -0.33
PNKP-202ENST00000593706 CD40P25942 277 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 APOBEC1P41238 236 aaKnown RBP12.96□□□□□ -0.33
PNKP-202ENST00000593706 LRRC74AQ0VAA2 488 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 MAPK11Q15759 364 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 ATAD3BQ5T9A4 648 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 MSANTD1Q6ZTZ1 278 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 MTDHQ86UE4 582 aaKnown RBP12.96□□□□□ -0.33
PNKP-202ENST00000593706 RNF130Q86XS8 419 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 OR10H5Q8NGA6 315 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 OR9I1Q8NGQ6 314 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 ROPN1LQ96C74 230 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 PANX1Q96RD7 426 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 BEX2Q9BXY8 128 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 EXD2Q9NVH0 621 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 CHRNA9Q9UGM1 479 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 SLC25A15Q9Y619 301 aa12.96□□□□□ -0.33
PNKP-202ENST00000593706 A0A096LNT2 108 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 ZNF716A6NP11 495 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 HMGB1P1B2RPK0 211 aaPredicted RBP12.95□□□□□ -0.34
PNKP-202ENST00000593706 MRPL33O75394 65 aaKnown RBP12.95□□□□□ -0.34
PNKP-202ENST00000593706 SASH3O75995 380 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 TGDSO95455 350 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 PMS2P2O95744 297 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 IL6P05231 212 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 BMP4P12644 408 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 HOXB9P17482 250 aaPredicted RBP12.95□□□□□ -0.34
PNKP-202ENST00000593706 RYKP34925 604 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 CHI3L1P36222 383 aaPredicted RBP12.95□□□□□ -0.34
PNKP-202ENST00000593706 PGM1P36871 562 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 TXNL4AP83876 142 aaKnown RBP12.95□□□□□ -0.34
PNKP-202ENST00000593706 VLDLRP98155 873 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 LOXL1Q08397 574 aaPredicted RBP12.95□□□□□ -0.34
PNKP-202ENST00000593706 PDK3Q15120 406 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 COX20Q5RI15 118 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 NXNQ6DKJ4 435 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 OR7E24Q6IFN5 339 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 CASP12Q6UXS9 341 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 B3GLCTQ6Y288 498 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 HDXQ7Z353 690 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 XAGE5Q8WWM1 108 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 ZG16BQ96DA0 208 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 ZBTB18Q99592 522 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 AMBRA1Q9C0C7 1298 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 SLC38A1Q9H2H9 487 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 CTPS2Q9NRF8 586 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 LPAR3Q9UBY5 353 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 MALT1Q9UDY8 824 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 SLC35A3Q9Y2D2 325 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 WDR45Q9Y484 360 aa12.95□□□□□ -0.34
PNKP-202ENST00000593706 ELOA3DA6NLF2 546 aaPredicted RBP12.94□□□□□ -0.34
PNKP-202ENST00000593706 H7C417 338 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 UBDO15205 165 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 DNPH1O43598 174 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 GSNP06396 782 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 CHRM4P08173 479 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 CSF3P09919 207 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 ZCCHC18P0CG32 403 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 RPS4Y1P22090 263 aaKnown RBP12.94□□□□□ -0.34
PNKP-202ENST00000593706 MAGEA8P43361 318 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 IDH3AP50213 366 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 HPCAP84074 193 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 CHRNB3Q05901 458 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 ELOA3BQ3SY89 546 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 C9orf135Q5VTT2 229 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 ZNF544Q6NX49 715 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 GRINAQ7Z429 371 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 TRIML2Q8N7C3 387 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 ANKFN1Q8N957 763 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 ELOA3Q8NG57 546 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 ARL5BQ96KC2 179 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 TRNT1Q96Q11 434 aaKnown RBP12.94□□□□□ -0.34
PNKP-202ENST00000593706 EBF4Q9BQW3 602 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 CCDC106Q9BWC9 280 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 C1QTNF6Q9BXI9 259 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 OR11A1Q9GZK7 315 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 SHARPINQ9H0F6 387 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 FKRPQ9H9S5 495 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 SLC52A3Q9NQ40 469 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 UPB1Q9UBR1 384 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 HDGFL3Q9Y3E1 203 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 ATP23Q9Y6H3 246 aa12.94□□□□□ -0.34
PNKP-202ENST00000593706 DSPPQ9NZW4 1301 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 RFXANKO14593 260 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 ITGA5P08648 1049 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 CCNA2P20248 432 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 OR2B6P58173 313 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 GABRA6Q16445 453 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 SYPL1Q16563 259 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 GTDC1Q4AE62 458 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 CYB5R2Q6BCY4 276 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 ZNF621Q6ZSS3 439 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 MIER2Q8N344 545 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 ARFGAP2Q8N6H7 521 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 OR52E4Q8NGH9 312 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 PNPT1Q8TCS8 783 aaKnown RBP12.93□□□□□ -0.34
PNKP-202ENST00000593706 LRRC8CQ8TDW0 803 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 C10orf105Q8TEF2 133 aa12.93□□□□□ -0.34
PNKP-202ENST00000593706 VPS33AQ96AX1 596 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms