RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 OSGIN1Q9UJX0 560 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 SIGLEC7Q9Y286 467 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 WIF1Q9Y5W5 379 aa13.06□□□□□ -0.32
TTC39A-216ENST00000530004 ANKUB1A6NFN9 424 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 B4DXG7 233 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 LRRN3E7EW58 273 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 K7EM74 188 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 TLX2O43763 284 aaPredicted RBP13.05□□□□□ -0.32
TTC39A-216ENST00000530004 HCN1O60741 890 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 BMP7P18075 431 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 CCNA2P20248 432 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 CXCR1P25024 350 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 CASP3P42574 277 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 SUMO3P55854 103 aaPredicted RBP13.05□□□□□ -0.32
TTC39A-216ENST00000530004 PGGHGQ32M88 737 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 SMARCD3Q6STE5 483 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 KCTD8Q6ZWB6 473 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 SPARTQ8N0X7 666 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 OR52L1Q8NGH7 329 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 TM9SF4Q92544 642 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 TEX12Q9BXU0 123 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 PRRG3Q9BZD7 231 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 CCDC90BQ9GZT6 254 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 MED11Q9P086 117 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 ERVK-18Q9QC07 812 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 SNX5Q9Y5X3 404 aa13.05□□□□□ -0.32
TTC39A-216ENST00000530004 SH3D21A4FU49 640 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 ENTPD6O75354 484 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 PTP4A3O75365 173 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 CH25HO95992 272 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 FAM87AP0C7U9 286 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 CCL3P10147 92 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 ALDH3B2P48448 385 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 CD97P48960 835 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 POLR2HP52434 150 aaKnown RBP13.04□□□□□ -0.32
TTC39A-216ENST00000530004 MLLT10P55197 1068 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 EGR4Q05215 589 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 TMEM201Q5SNT2 666 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 SLC22A10Q63ZE4 541 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 TMEM81Q6P7N7 255 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 THSD4Q6ZMP0 1018 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 AHSA2Q719I0 299 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 SLC46A3Q7Z3Q1 461 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 GRINAQ7Z429 371 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 PSD4Q8NDX1 1056 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 MDS2Q8NDY4 140 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 IPCEF1Q8WWN9 437 aaPredicted RBP13.04□□□□□ -0.32
TTC39A-216ENST00000530004 TMEM234Q8WY98 164 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 Q96MT0 163 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 TNFRSF13CQ96RJ3 184 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 ENKD1Q9H0I2 346 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 UBQLN3Q9H347 655 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 HHATLQ9HCP6 504 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 CCNB1IP1Q9NPC3 277 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 DNAJC27Q9NZQ0 273 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 PSORS1C1Q9UIG5 152 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 TUBD1Q9UJT1 453 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 HRH3Q9Y5N1 445 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 CSAG2Q9Y5P2 127 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 CPAMD8Q8IZJ3 1885 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 CACNA1GO43497 2377 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 IGLV3-32A0A0A0MS00 114 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 CLCA1A8K7I4 914 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 SURF4O15260 269 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 RGS10O43665 173 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 SLC25A12O75746 678 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 OR7A10O76100 309 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 WISP1O95388 367 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 MSX1P28360 303 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 TNFSF10P50591 281 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 EFNB1P98172 346 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 ZBED5Q49AG3 693 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 PRAMEF20Q5VT98 475 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 BCDIN3DQ7Z5W3 292 aaKnown RBP13.04□□□□□ -0.32
TTC39A-216ENST00000530004 ZADH2Q8N4Q0 377 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 FAM26EQ8N5C1 309 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 LRRC17Q8N6Y2 441 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 TMEM163Q8TC26 289 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.04□□□□□ -0.32
TTC39A-216ENST00000530004 MCCC2Q9HCC0 563 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 TIMMDC1Q9NPL8 285 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 TP53TG5Q9Y2B4 290 aa13.04□□□□□ -0.32
TTC39A-216ENST00000530004 MAP1BP46821 2468 aaKnown RBP13.04□□□□□ -0.32
TTC39A-216ENST00000530004 MGAQ8IWI9 3026 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 TMED7-TICAM2A0A0A6YYA0 188 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 HTR3EA5X5Y0 456 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 ANKRD33BA6NCL7 494 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 BHLHE40O14503 412 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 IGF2P01344 180 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 HMGN1P05114 100 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 SLC9A3P48764 834 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 SNTA1Q13424 505 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 FHL1Q13642 323 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 INPP5JQ15735 1006 aaPredicted RBP13.03□□□□□ -0.32
TTC39A-216ENST00000530004 NEDD8Q15843 81 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 ZNF74Q16587 644 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 OCLNQ16625 522 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 FOXB2Q5VYV0 432 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 ARSKQ6UWY0 536 aa13.03□□□□□ -0.32
TTC39A-216ENST00000530004 C10orf53Q8N6V4 93 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms