RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ARRDC1-AS1Q9H2J1 176 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 EP300Q09472 2414 aaPredicted RBP11.11□□□□□ -0.63
LIN54-206ENST00000506560 CPAMD8Q8IZJ3 1885 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 FAM86C2PA6NEL3 165 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 SNTNA6NMZ2 147 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 E9PI62 339 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 MEN1O00255 615 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 CBFA2T3O75081 653 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 TSPAN19P0C672 248 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 PEPDP12955 493 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 CELP19835 753 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 PSMA1P25786 263 aaKnown RBP11.11□□□□□ -0.63
LIN54-206ENST00000506560 RPS5P46782 204 aaKnown RBP11.11□□□□□ -0.63
LIN54-206ENST00000506560 EMP2P54851 167 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 CAV3P56539 151 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 FABP5Q01469 135 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 SLC23A3Q6PIS1 610 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 OVCH1Q7RTY7 1134 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 DUSP19Q8WTR2 217 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 TSSK2Q96PF2 358 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 KATNB1Q9BVA0 655 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 TBL1XR1Q9BZK7 514 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 SNTG1Q9NSN8 517 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 TXNL4BQ9NX01 149 aaKnown RBP11.11□□□□□ -0.63
LIN54-206ENST00000506560 RALGAPA1Q6GYQ0 2036 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 TRBV11-1A0A0K0K1C0 115 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 FUOMA2VDF0 154 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 RIIAD1A6NNX1 92 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 ALG1L2C9J202 215 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 TO15178 435 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 OR7A10O76100 309 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 NDUFB2O95178 105 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 SLC6A6P31641 620 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 EVI2BP34910 448 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 ZNF74Q16587 644 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 OTPQ5XKR4 325 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 BMPERQ8N8U9 685 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 FAM98AQ8NCA5 519 aaKnown RBP11.11□□□□□ -0.63
LIN54-206ENST00000506560 TAAR8Q969N4 342 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 SLC35B4Q969S0 331 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 C1GALT1C1Q96EU7 318 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 Q96M85 177 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 CRB3Q9BUF7 120 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 TMED9Q9BVK6 235 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 HOXD1Q9GZZ0 328 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 ADGRL4Q9HBW9 690 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 FBXO8Q9NRD0 319 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 STUB1Q9UNE7 303 aa11.11□□□□□ -0.63
LIN54-206ENST00000506560 EXOSC1Q9Y3B2 195 aaKnown RBP11.11□□□□□ -0.63
LIN54-206ENST00000506560 SHISA3A0PJX4 238 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 SLC35F4A4IF30 521 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 OR6C68A6NDL8 312 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 SAGE2PA6NJ88 616 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 VSTM2BA6NLU5 285 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 H7C1C5 153 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 NTN3O00634 580 aaPredicted RBP11.1□□□□□ -0.63
LIN54-206ENST00000506560 FADS1O60427 444 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 CER1O95813 267 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 TFP02787 698 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 ZNF12P17014 697 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 PAICSP22234 425 aaKnown RBP11.1□□□□□ -0.63
LIN54-206ENST00000506560 NAA10P41227 235 aaPredicted RBP11.1□□□□□ -0.63
LIN54-206ENST00000506560 CD97P48960 835 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 LCN6P62502 163 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 CBX3Q13185 183 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 INPP5JQ15735 1006 aaPredicted RBP11.1□□□□□ -0.63
LIN54-206ENST00000506560 RPTNQ6XPR3 784 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 KBTBD8Q8NFY9 601 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 HDHD5Q9BXW7 423 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 LAT2Q9GZY6 243 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 MMP25Q9NPA2 562 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 ASB6Q9NWX5 421 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 NPFFR2Q9Y5X5 522 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 HK1P19367 917 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 TCEA1P23193 301 aaKnown RBP11.1□□□□□ -0.63
LIN54-206ENST00000506560 DCAF7P61962 342 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 RPS4XP62701 263 aaKnown RBP11.1□□□□□ -0.63
LIN54-206ENST00000506560 MADCAM1Q13477 382 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 CRTC2Q53ET0 693 aaPredicted RBP11.1□□□□□ -0.63
LIN54-206ENST00000506560 RPL13AP3Q6NVV1 102 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 ZNF322Q6U7Q0 402 aaPredicted RBP11.1□□□□□ -0.63
LIN54-206ENST00000506560 TP53INP1Q96A56 240 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 ALG8Q9BVK2 526 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 SEMA4CQ9C0C4 833 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 OR11A1Q9GZK7 315 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 RXFP3Q9NSD7 469 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 ZMIZ1Q9ULJ6 1067 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 CAB39Q9Y376 341 aaPredicted RBP11.1□□□□□ -0.63
LIN54-206ENST00000506560 GRIP1Q9Y3R0 1128 aa11.1□□□□□ -0.63
LIN54-206ENST00000506560 TEX13CA0A0J9YWL9 993 aa11.09□□□□□ -0.63
LIN54-206ENST00000506560 SHISA8B8ZZ34 492 aa11.09□□□□□ -0.63
LIN54-206ENST00000506560 CDRT1O95170 752 aa11.09□□□□□ -0.63
LIN54-206ENST00000506560 SP9P0CG40 484 aa11.09□□□□□ -0.63
LIN54-206ENST00000506560 ZNF3P17036 446 aa11.09□□□□□ -0.63
LIN54-206ENST00000506560 TUBA1BP68363 451 aa11.09□□□□□ -0.63
LIN54-206ENST00000506560 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.09□□□□□ -0.63
LIN54-206ENST00000506560 TUBA1AQ71U36 451 aa11.09□□□□□ -0.63
LIN54-206ENST00000506560 GID4Q8IVV7 300 aa11.09□□□□□ -0.63
LIN54-206ENST00000506560 ACBD7Q8N6N7 88 aa11.09□□□□□ -0.63
LIN54-206ENST00000506560 CEP76Q8TAP6 659 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms