RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 DUSP19Q8WTR2 217 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 CENPNQ96H22 339 aaPredicted RBP11.4□□□□□ -0.58
PNKP-217ENST00000625216 ZNF300Q96RE9 604 aaPredicted RBP11.4□□□□□ -0.58
PNKP-217ENST00000625216 TUBA1CQ9BQE3 449 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 G6PC3Q9BUM1 346 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 TBL1XR1Q9BZK7 514 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 DNAJB9Q9UBS3 223 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 IFT52Q9Y366 437 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 ENPP4Q9Y6X5 453 aa11.4□□□□□ -0.58
PNKP-217ENST00000625216 KDM4EB2RXH2 506 aaPredicted RBP11.39□□□□□ -0.59
PNKP-217ENST00000625216 IFNW1P05000 195 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 TMIGD3P0DMS9 266 aaPredicted RBP11.39□□□□□ -0.59
PNKP-217ENST00000625216 HK1P19367 917 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 FUT4P22083 530 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 UQCRC1P31930 480 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 KIR2DL3P43628 341 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 YAP1P46937 504 aaKnown RBP11.39□□□□□ -0.59
PNKP-217ENST00000625216 STARP49675 285 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 ATP12AP54707 1039 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 B3GALT5-AS1P59052 145 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 SRYQ05066 204 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 PPP1R8Q12972 351 aaKnown RBP11.39□□□□□ -0.59
PNKP-217ENST00000625216 LARS2Q15031 903 aaKnown RBP11.39□□□□□ -0.59
PNKP-217ENST00000625216 GRAMD1BQ3KR37 738 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 MRPL2Q5T653 305 aaKnown RBP11.39□□□□□ -0.59
PNKP-217ENST00000625216 RNF220Q5VTB9 566 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 DEF8Q6ZN54 512 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 CHMP1BQ7LBR1 199 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 MARCH3Q86UD3 253 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 HEATR5AQ86XA9 2040 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 KIF18BQ86Y91 864 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 ZNF614Q8N883 585 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 C9orf106Q8NAJ2 232 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 OR6T1Q8NGN1 323 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 PMM1Q92871 262 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 CIB1Q99828 191 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 PIGQQ9BRB3 760 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 TACO1Q9BSH4 297 aaKnown RBP11.39□□□□□ -0.59
PNKP-217ENST00000625216 SFXN3Q9BWM7 321 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 CACYBPQ9HB71 228 aaKnown RBP11.39□□□□□ -0.59
PNKP-217ENST00000625216 RLIMQ9NVW2 624 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 JKAMPQ9P055 326 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 MED11Q9P086 117 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 PRDM4Q9UKN5 801 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 OAZ3Q9UMX2 235 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 PDZD2O15018 2839 aa11.39□□□□□ -0.59
PNKP-217ENST00000625216 INTS1Q8N201 2190 aaKnown RBP11.38□□□□□ -0.59
PNKP-217ENST00000625216 CLCA1A8K7I4 914 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 B4DXG7 233 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 ALG1L2C9J202 215 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 SOCS2O14508 198 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 HCRTR2O43614 444 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 OXSR1O95747 527 aaPredicted RBP11.38□□□□□ -0.59
PNKP-217ENST00000625216 ANGPTL1O95841 491 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 CRHP06850 196 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 IL7RP16871 459 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 TBXA2RP21731 343 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 RRM2P31350 389 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 CLDN18P56856 261 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 KRTAP10-9P60411 292 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 SPIBQ01892 262 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 FGFBP1Q14512 234 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 RAET1LQ5VY80 246 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 OR2A2Q6IF42 318 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 MISPQ8IVT2 679 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 HS3ST5Q8IZT8 346 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 MEIOBQ8N635 442 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 OR4C3Q8NH37 302 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 FAM222BQ8WU58 562 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 C1GALT1C1Q96EU7 318 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 BDH2Q9BUT1 245 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 UBQLN4Q9NRR5 601 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 CLCF1Q9UBD9 225 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 SLC9A8Q9Y2E8 581 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 RPH3AQ9Y2J0 694 aaPredicted RBP11.38□□□□□ -0.59
PNKP-217ENST00000625216 TESMINQ9Y4I5 508 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 DTNAQ9Y4J8 743 aa11.38□□□□□ -0.59
PNKP-217ENST00000625216 OTOGQ6ZRI0 2925 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 NCKAP5O14513 1909 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 A0A087WZY1 265 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 CDHR4A6H8M9 788 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 PDLIM1O00151 329 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 GNGT2O14610 69 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 FFAR1O14842 300 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 NDUFB5O43674 189 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 TPST2O60704 377 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 HPGDP15428 266 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 ZNF23P17027 643 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 ZNF26P17031 533 aaPredicted RBP11.37□□□□□ -0.59
PNKP-217ENST00000625216 ITGA2P17301 1181 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 POU3F2P20265 443 aaPredicted RBP11.37□□□□□ -0.59
PNKP-217ENST00000625216 RGS8P57771 180 aaPredicted RBP11.37□□□□□ -0.59
PNKP-217ENST00000625216 HOXC5Q00444 222 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 SORDQ00796 357 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 LAPTM4AQ15012 233 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 CD226Q15762 336 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 NDUFAF6Q330K2 333 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 TBPL2Q6SJ96 375 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 IZUMO2Q6UXV1 221 aa11.37□□□□□ -0.59
PNKP-217ENST00000625216 APOOLQ6UXV4 268 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms