RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 GBE1Q04446 702 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 EIPR1Q53HC9 387 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 ARMC12Q5T9G4 340 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 METTL11BQ5VVY1 283 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 KDM7AQ6ZMT4 941 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 TTC5Q8N0Z6 440 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 CADM2Q8N3J6 435 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 HTR3CQ8WXA8 447 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 ST8SIA1Q92185 356 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 RAPGEF5Q92565 580 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 HAVCR1Q96D42 359 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 CXorf40BQ96DE9 158 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 CLCC1Q96S66 551 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 ATOH8Q96SQ7 321 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 NHEJ1Q9H9Q4 299 aaPredicted RBP3.84□□□□□ -1.79
CNOT1-209ENST00000566240 SLC2A8Q9NY64 477 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 BFARQ9NZS9 450 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 CA5BQ9Y2D0 317 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 PLLPQ9Y342 182 aa3.84□□□□□ -1.79
CNOT1-209ENST00000566240 MAGI1Q96QZ7 1491 aaPredicted RBP3.84□□□□□ -1.8
CNOT1-209ENST00000566240 PPIAL4EA0A075B759 164 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 SMIM28A0A1B0GU29 152 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 HEATR9A2RTY3 570 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 WBP4O75554 376 aaKnown RBP3.83□□□□□ -1.8
CNOT1-209ENST00000566240 PPIAL4FP0DN26 164 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 ATP1B2P14415 290 aaPredicted RBP3.83□□□□□ -1.8
CNOT1-209ENST00000566240 CCNCP24863 283 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 ANXA13P27216 316 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 CASP14P31944 242 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 GYG1P46976 350 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 PRMT2P55345 433 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 SLC8A3P57103 927 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 CDK16Q00536 496 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 CHRNB3Q05901 458 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 VGLL4Q14135 290 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 GK3PQ14409 553 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 RCN1Q15293 331 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 OLFML2AQ68BL7 652 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 ECHDC2Q86YB7 292 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 OR56B4Q8NH76 319 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 RAB3IL1Q8TBN0 382 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 FAM110BQ8TC76 370 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 TBX15Q96SF7 602 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 RNF2Q99496 336 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 SRXN1Q9BYN0 137 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 REEP4Q9H6H4 257 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 AZI2Q9H6S1 392 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 PISDQ9UG56 409 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 COPS3Q9UNS2 423 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 SNED1Q8TER0 1413 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 AQRO60306 1485 aaKnown RBP eCLIP3.83□□□□□ -1.83e-13■■□□□ 13.9
CNOT1-209ENST00000566240 ARHGAP35Q9NRY4 1499 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 EHBP1L1Q8N3D4 1523 aa3.83□□□□□ -1.8
CNOT1-209ENST00000566240 CACNA1FO60840 1977 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 ITSN2Q9NZM3 1697 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 IQANK1A0A1B0GTG1 560 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 TCRBV9S1A1TA0A576 114 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 A8MXQ7 604 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 KLHL41O60662 606 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 UPK3AO75631 287 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 SLITRK3O94933 977 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 ZNF853P0CG23 659 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 GDF1P27539 372 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 CD1CP29017 333 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 PTGDSP41222 190 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 PKNOX1P55347 436 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 LMO4P61968 165 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 BST2Q10589 180 aaKnown RBP3.82□□□□□ -1.8
CNOT1-209ENST00000566240 MRPL28Q13084 256 aaKnown RBP3.82□□□□□ -1.8
CNOT1-209ENST00000566240 SRSF5Q13243 272 aaKnown RBP3.82□□□□□ -1.8
CNOT1-209ENST00000566240 GRB7Q14451 532 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 DUSP7Q16829 419 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 Q1RN00 199 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 RNLSQ5VYX0 342 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 CGB2Q6NT52 195 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 ENPP6Q6UWR7 440 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 DNM1P46Q6ZS02 220 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 PAQR7Q86WK9 346 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 C17orf82Q86X59 251 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-209ENST00000566240 NRMQ8IXM6 262 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-209ENST00000566240 OR52H1Q8NGJ2 320 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 OR1L6Q8NGR2 347 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 KCNG3Q8TAE7 436 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 GTSF1Q8WW33 167 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 SERAC1Q96JX3 654 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 FMO2Q99518 471 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 NUP58Q9BVL2 599 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 UBXN6Q9BZV1 441 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 FAM192AQ9GZU8 254 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 ANKRD19PQ9H560 264 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 RAB20Q9NX57 234 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 SLC7A8Q9UHI5 535 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 TMED5Q9Y3A6 229 aa3.82□□□□□ -1.8
CNOT1-209ENST00000566240 CFAP65Q6ZU64 1925 aaKnown RBP3.82□□□□□ -1.8
CNOT1-209ENST00000566240 SNAPC4Q5SXM2 1469 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.81□□□□□ -1.8
CNOT1-209ENST00000566240 PLEKHH1Q9ULM0 1364 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 A0A1W2PPE3 182 aa3.81□□□□□ -1.8
CNOT1-209ENST00000566240 GAPDHP04406 335 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms