RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 ZNF367Q7RTV3 350 aa11.55□□□□□ -0.56
USP3-213ENST00000559711 CPOQ8IVL8 374 aa11.55□□□□□ -0.56
USP3-213ENST00000559711 ARMC10Q8N2F6 343 aa11.55□□□□□ -0.56
USP3-213ENST00000559711 LRRC17Q8N6Y2 441 aa11.55□□□□□ -0.56
USP3-213ENST00000559711 NACC2Q96BF6 587 aa11.55□□□□□ -0.56
USP3-213ENST00000559711 RNFT2Q96EX2 444 aa11.55□□□□□ -0.56
USP3-213ENST00000559711 RYDENQ9NUL5 291 aaKnown RBP11.55□□□□□ -0.56
USP3-213ENST00000559711 TAS2R10Q9NYW0 307 aa11.55□□□□□ -0.56
USP3-213ENST00000559711 FARSAQ9Y285 508 aaKnown RBP11.55□□□□□ -0.56
USP3-213ENST00000559711 OTOGLQ3ZCN5 2332 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 IGLV3-32A0A0A0MS00 114 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 NSG1A0A0A6YYJ2 146 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 ANKUB1A6NFN9 424 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 LRRN3E7EW58 273 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 GABARAPO95166 117 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 RAB36O95755 333 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 NUDT14O95848 222 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 CCNA2P20248 432 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 TGFBR2P37173 567 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 POLR2HP52434 150 aaKnown RBP11.54□□□□□ -0.56
USP3-213ENST00000559711 CDH11P55287 796 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 PRPS1P60891 318 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 SSPNQ14714 243 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 CTF1Q16619 201 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 ZNF791Q3KP31 576 aaPredicted RBP11.54□□□□□ -0.56
USP3-213ENST00000559711 ANKDD1AQ495B1 522 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 SLC35F1Q5T1Q4 408 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 HES3Q5TGS1 186 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 DPY19L2P2Q6ZN68 376 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 CXXC5Q7LFL8 322 aaKnown RBP11.54□□□□□ -0.56
USP3-213ENST00000559711 GRINAQ7Z429 371 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 PPP1R32Q7Z5V6 425 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 GID4Q8IVV7 300 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 PRSS33Q8NF86 280 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 PROKR2Q8NFJ6 384 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 PTP4A1Q93096 173 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 SPACA9Q96E40 222 aaPredicted RBP11.54□□□□□ -0.56
USP3-213ENST00000559711 GPX7Q96SL4 187 aaPredicted RBP11.54□□□□□ -0.56
USP3-213ENST00000559711 TAPBPLQ9BX59 468 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 TAS2R16Q9NYV7 291 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 H2AFY2Q9P0M6 372 aaPredicted RBP11.54□□□□□ -0.56
USP3-213ENST00000559711 NCDNQ9UBB6 729 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 CHRNA9Q9UGM1 479 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 ERGIC3Q9Y282 383 aa11.54□□□□□ -0.56
USP3-213ENST00000559711 LSM2Q9Y333 95 aaKnown RBP11.54□□□□□ -0.56
USP3-213ENST00000559711 ETV2O00321 342 aaPredicted RBP11.53□□□□□ -0.56
USP3-213ENST00000559711 NPIPB7O75200 414 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 PPP1R3DO95685 299 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 CELA2AP08217 269 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 TSPAN19P0C672 248 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 ASAH2BP0C7U1 165 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 HK1P19367 917 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 MSX1P28360 303 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 LIPAP38571 399 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 PTGDSP41222 190 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 HTR3AP46098 478 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 LTBQ06643 244 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 ITGADQ13349 1161 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 TMED1Q13445 227 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 ARHGAP11AQ6P4F7 1023 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 P2RY8Q86VZ1 359 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 ADGRG3Q86Y34 549 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 ESX1Q8N693 406 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 NANOGP1Q8N7R0 232 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 BBS1Q8NFJ9 593 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 OR10G3Q8NGC4 313 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 ST8SIA1Q92185 356 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 KTI12Q96EK9 354 aaPredicted RBP11.53□□□□□ -0.56
USP3-213ENST00000559711 OR5M11Q96RB7 305 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 FAM117AQ9C073 453 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 B3GNT4Q9C0J1 378 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 RACGAP1Q9H0H5 632 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 GALNT9Q9HCQ5 603 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 NANSQ9NR45 359 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 FOXJ2Q9P0K8 574 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 CLEC2DQ9UHP7 191 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 EXOGQ9Y2C4 368 aaKnown RBP11.53□□□□□ -0.56
USP3-213ENST00000559711 HIF3AQ9Y2N7 669 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 YARS2Q9Y2Z4 477 aaKnown RBP11.53□□□□□ -0.56
USP3-213ENST00000559711 HEATR5AQ86XA9 2040 aa11.53□□□□□ -0.56
USP3-213ENST00000559711 TRAV36DV7A0A075B6V5 113 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 TMED7-TICAM2A0A0A6YYA0 188 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 FAM183AA6NL82 134 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 RIIAD1A6NNX1 92 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 B4DXG7 233 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 MCIDASD6RGH6 385 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 M0R3G1 203 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 ARPC3O15145 178 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 IDH3BO43837 385 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 GMFGO60234 142 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 ITGA10O75578 1167 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 IFNGP01579 166 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 ICAM2P13598 275 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 CD36P16671 472 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 CASP3P42574 277 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 RPS15P62841 145 aaKnown RBP11.52□□□□□ -0.56
USP3-213ENST00000559711 NFATC3Q12968 1075 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 ARMCX4Q5H9R4 360 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 STPG1Q5TH74 334 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 PLBD1Q6P4A8 553 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms