RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 ZNF74Q16587 644 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 NKAIN1Q4KMZ8 207 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 DPY19L2P2Q6ZN68 376 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 PARP16Q8N5Y8 322 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 PIGKQ92643 395 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 EDAQ92838 391 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 OTULINQ96BN8 352 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 OMA1Q96E52 524 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 CCDC74BQ96LY2 380 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 ERMAPQ96PL5 475 aaPredicted RBP12.93□□□□□ -0.34
LDB3-207ENST00000542786 SDHCQ99643 169 aaPredicted RBP12.93□□□□□ -0.34
LDB3-207ENST00000542786 SEMA4CQ9C0C4 833 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 C12orf10Q9HB07 376 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 NRIP3Q9NQ35 241 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 ASB6Q9NWX5 421 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 ZMIZ1Q9ULJ6 1067 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 PPIEQ9UNP9 301 aaKnown RBP12.93□□□□□ -0.34
LDB3-207ENST00000542786 ADAM18Q9Y3Q7 739 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 PNMA8CA0A1B0GUJ8 204 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 FADS1O60427 444 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 IFNGP01579 166 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 ABCD3P28288 659 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 LTBQ06643 244 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 GGTLC2Q14390 218 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 GXYLT1Q4G148 440 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 PWWP2BQ6NUJ5 590 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 SHISA6Q6ZSJ9 500 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 ANKRD37Q7Z713 158 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 NPEPL1Q8NDH3 523 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 OR52E2Q8NGJ4 325 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 MOSPD2Q8NHP6 518 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 MOGAT1Q96PD6 335 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 OR6C1Q96RD1 312 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 ALG8Q9BVK2 526 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 NUAK2Q9H093 628 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 OR51V1Q9H2C8 321 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 SNTG1Q9NSN8 517 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 TOR4AQ9NXH8 423 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 PLEKHB1Q9UF11 243 aaPredicted RBP12.93□□□□□ -0.34
LDB3-207ENST00000542786 KLHL21Q9UJP4 597 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 HIF3AQ9Y2N7 669 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 IER3IP1Q9Y5U9 82 aa12.93□□□□□ -0.34
LDB3-207ENST00000542786 LAMA1P25391 3075 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 SLC35F4A4IF30 521 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 ELOA3DA6NLF2 546 aaPredicted RBP12.92□□□□□ -0.34
LDB3-207ENST00000542786 VSTM2BA6NLU5 285 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 GTPBP1O00178 669 aaKnown RBP12.92□□□□□ -0.34
LDB3-207ENST00000542786 YKT6O15498 198 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 CDRT1O95170 752 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 WISP1O95388 367 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 HPGDP15428 266 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 UQCRC1P31930 480 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 RORCP51449 518 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 PNLIPRP2P54317 469 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 PLCXD2Q0VAA5 305 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 GPR50Q13585 617 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 ELOA3BQ3SY89 546 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 CRTC2Q53ET0 693 aaPredicted RBP12.92□□□□□ -0.34
LDB3-207ENST00000542786 KLHL12Q53G59 568 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 TMEM91Q6ZNR0 172 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 NUP54Q7Z3B4 507 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 MARCH3Q86UD3 253 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 KLBQ86Z14 1044 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 EID2Q8N6I1 236 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 ATP6V1C2Q8NEY4 427 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 ELOA3Q8NG57 546 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 OR2I1PQ8NGU4 316 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 OR4K13Q8NH42 304 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 ZC3H10Q96K80 434 aaKnown RBP12.92□□□□□ -0.34
LDB3-207ENST00000542786 KCTD7Q96MP8 289 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 WDFY2Q96P53 400 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 COQ7Q99807 217 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 KCNS3Q9BQ31 491 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 MMP25Q9NPA2 562 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 CRNNQ9UBG3 495 aaPredicted RBP12.92□□□□□ -0.34
LDB3-207ENST00000542786 COPS7AQ9UBW8 275 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 UGT2A1Q9Y4X1 527 aa12.92□□□□□ -0.34
LDB3-207ENST00000542786 IGHV3-20A0A0C4DH32 117 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 SHISA3A0PJX4 238 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 SAGE2PA6NJ88 616 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 EIF4E2O60573 245 aaKnown RBP12.91□□□□□ -0.34
LDB3-207ENST00000542786 CBFA2T3O75081 653 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 TFP02787 698 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 GYPBP06028 91 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 ASAH2BP0C7U1 165 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 OCM2P0CE71 109 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 OCMP0CE72 109 aaPredicted RBP12.91□□□□□ -0.34
LDB3-207ENST00000542786 PAICSP22234 425 aaKnown RBP12.91□□□□□ -0.34
LDB3-207ENST00000542786 GALP22466 123 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 IL12BP29460 328 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 TNFSF8P32971 234 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 S100A5P33763 92 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 SDC2P34741 201 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 ATP6V1E1P36543 226 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 SLC6A8P48029 635 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 PSMD7P51665 324 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 CCR4P51679 360 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.91□□□□□ -0.34
LDB3-207ENST00000542786 HLA-DQA1Q5Y7H0 255 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 TMPRSS11AQ6ZMR5 421 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms