RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 MAP2K6P52564 334 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 CASP9P55211 416 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 OR2B6P58173 313 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 ABCE1P61221 599 aaKnown RBP12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 SLC35A1P78382 337 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 IRX1P78414 480 aaPredicted RBP12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 TGFBR3Q03167 851 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 CHRNEQ04844 493 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 FUT5Q11128 374 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 GNA13Q14344 377 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 CASP8Q14790 479 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 ELOA3BQ3SY89 546 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 C6orf52Q5T4I8 152 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 ANKRD46Q86W74 232 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 ADGRG3Q86Y34 549 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 TRIML2Q8N7C3 387 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 ELOA3Q8NG57 546 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 OR10H5Q8NGA6 315 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 DDIT4LQ96D03 193 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 MUS81Q96NY9 551 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 SLC35A5Q9BS91 424 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 NAA11Q9BSU3 229 aaPredicted RBP12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 AMBRA1Q9C0C7 1298 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 OR11A1Q9GZK7 315 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 FKRPQ9H9S5 495 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 CDC42EP3Q9UKI2 254 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 RAP2CQ9Y3L5 183 aa12.84□□□□□ -0.35
SCARNA20.5-201ENST00000516991 HEATR1Q9H583 2144 aaKnown RBP12.83□□□□□ -0.35
SCARNA20.5-201ENST00000516991 A0A096LNT2 108 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 TMED7-TICAM2A0A0A6YYA0 188 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 E9PBE3 544 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 M0R1B8 84 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 FAAHO00519 579 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 BIRC5O15392 142 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 ZNF208O43345 1280 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 BCAS1O75363 584 aaPredicted RBP12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 ITGA5P08648 1049 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 S100A3P33764 101 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 IDH2P48735 452 aaKnown RBP12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 FABP6P51161 128 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 POLR2HP52434 150 aaKnown RBP12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 VSNL1P62760 191 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 H3F3AP84243 136 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 CHRNB3Q05901 458 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 LOXL1Q08397 574 aaPredicted RBP12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 SPOCK1Q08629 439 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 RAB35Q15286 201 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 CHI3L2Q15782 390 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 GABRA6Q16445 453 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 ZNF781Q8N8C0 355 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 TRIM44Q96DX7 344 aaPredicted RBP12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 PKNOX2Q96KN3 472 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 PPP1R36Q96LQ0 422 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 CCDC115Q96NT0 180 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 TRNT1Q96Q11 434 aaKnown RBP12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 INPP5KQ9BT40 448 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 TMEM109Q9BVC6 243 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 UPB1Q9UBR1 384 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 BTNL2Q9UIR0 455 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 PRDM4Q9UKN5 801 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 TMED7Q9Y3B3 224 aa12.83□□□□□ -0.36
SCARNA20.5-201ENST00000516991 FAM234BA2RU67 622 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 AGAP5A6NIR3 686 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 PDLIM1O00151 329 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 ITM2AO43736 263 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 FAM157CP0CG43 387 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 CREB1P16220 341 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 LBPP18428 481 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 PTNP21246 168 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 RPL14P50914 215 aaKnown RBP12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 VLDLRP98155 873 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 PLAURQ03405 335 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 LRRC74AQ0VAA2 488 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 TMEM249Q2WGJ8 235 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 SPANXN4Q5MJ08 99 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 PAQR6Q6TCH4 344 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 KLHL24Q6TFL4 600 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 B3GLCTQ6Y288 498 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 CCDC103Q8IW40 242 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 ZNF440Q8IYI8 595 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 FAM168AQ92567 244 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 CNOT9Q92600 299 aaKnown RBP12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 TNFRSF13CQ96RJ3 184 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 SLC38A1Q9H2H9 487 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 SSU72Q9NP77 194 aaKnown RBP12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 SLC17A5Q9NRA2 495 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 FLVCR1Q9Y5Y0 555 aa12.82□□□□□ -0.36
SCARNA20.5-201ENST00000516991 ANK3Q12955 4377 aaKnown RBP12.81□□□□□ -0.36
SCARNA20.5-201ENST00000516991 HMGN4O00479 90 aa12.81□□□□□ -0.36
SCARNA20.5-201ENST00000516991 AP3D1O14617 1153 aa12.81□□□□□ -0.36
SCARNA20.5-201ENST00000516991 TM9SF1O15321 606 aa12.81□□□□□ -0.36
SCARNA20.5-201ENST00000516991 CCNA2P20248 432 aa12.81□□□□□ -0.36
SCARNA20.5-201ENST00000516991 RPS4Y1P22090 263 aaKnown RBP12.81□□□□□ -0.36
SCARNA20.5-201ENST00000516991 MPGP29372 298 aa12.81□□□□□ -0.36
SCARNA20.5-201ENST00000516991 NTF4P34130 210 aa12.81□□□□□ -0.36
SCARNA20.5-201ENST00000516991 SLC1A3P43003 542 aa12.81□□□□□ -0.36
SCARNA20.5-201ENST00000516991 PHC1P78364 1004 aa12.81□□□□□ -0.36
SCARNA20.5-201ENST00000516991 SLC17A1Q14916 467 aa12.81□□□□□ -0.36
SCARNA20.5-201ENST00000516991 FAM174BQ3ZCQ3 159 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 247.8 ms