RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZNF729A6NN14 1252 aaPredicted RBP11.44□□□□□ -0.58
USP11-206ENST00000469080 DISC1C4P0D8 188 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 SULT1C2O00338 296 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 B3GALT2O43825 422 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 GCM2O75603 506 aaPredicted RBP11.44□□□□□ -0.58
USP11-206ENST00000469080 MBP02144 154 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 CXCL3P19876 107 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 HNRNPA2B1P22626 353 aaKnown RBP11.44□□□□□ -0.58
USP11-206ENST00000469080 PCGF2P35227 344 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 CAV3P56539 151 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 CLDN20P56880 219 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 USF2Q15853 346 aaPredicted RBP11.44□□□□□ -0.58
USP11-206ENST00000469080 OR2T4Q8NH00 348 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 HS6ST2Q96MM7 605 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 AMDHD1Q96NU7 426 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 TSNAXQ99598 290 aaKnown RBP11.44□□□□□ -0.58
USP11-206ENST00000469080 JAM3Q9BX67 310 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 HDAC8Q9BY41 377 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 MED20Q9H944 212 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 FOLH1BQ9HBA9 442 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 KLHL1Q9NR64 748 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 GTF2A1LQ9UNN4 478 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 SPTA1P02549 2419 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 A0A1B0GVC2 190 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 ZC3H12DA2A288 527 aaKnown RBP11.44□□□□□ -0.58
USP11-206ENST00000469080 PRAMEF25A6NGN4 478 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 A6NIN4 97 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 PSMD9O00233 223 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 HMGN4O00479 90 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 TCAPO15273 167 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 SSNA1O43805 119 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 HCN1O60741 890 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 CTSVO60911 334 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 PSMA3P25788 255 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 CSNK1EP49674 416 aaKnown RBP11.44□□□□□ -0.58
USP11-206ENST00000469080 CRYBA2P53672 197 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 DPTQ07507 201 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 CLINT1Q14677 625 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 PODNL1Q6PEZ8 512 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 ADAMTSL4Q6UY14 1074 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 BEST4Q8NFU0 473 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 OR4D11Q8NGI4 311 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 SLC7A13Q8TCU3 470 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 SLC37A2Q8TED4 501 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 MMABQ96EY8 250 aaPredicted RBP11.44□□□□□ -0.58
USP11-206ENST00000469080 SLC6A18Q96N87 628 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 MCHR1Q99705 422 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 BARHL1Q9BZE3 327 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 PNO1Q9NRX1 252 aaKnown RBP11.44□□□□□ -0.58
USP11-206ENST00000469080 FBXO34Q9NWN3 711 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 MRTO4Q9UKD2 239 aaKnown RBP11.44□□□□□ -0.58
USP11-206ENST00000469080 PCDHGB7Q9Y5F8 929 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 PCDHGA6Q9Y5G7 932 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 PCDHGA5Q9Y5G8 931 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 PCDHGA1Q9Y5H4 931 aa11.44□□□□□ -0.58
USP11-206ENST00000469080 RHPN2P1A8MT19 583 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 FAM171A2A8MVW0 826 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 A8MXK9 166 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 OIP5O43482 229 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 KHDRBS3O75525 346 aaKnown RBP11.43□□□□□ -0.58
USP11-206ENST00000469080 CDRT1O95170 752 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 ANXA8P13928 327 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 PTBP1P26599 531 aaKnown RBP eCLIP11.43□□□□□ -0.581e-13■■□□□ 12.1
USP11-206ENST00000469080 ITGA1P56199 1179 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 NDUFAF6Q330K2 333 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 RGS7BPQ6MZT1 257 aaPredicted RBP11.43□□□□□ -0.58
USP11-206ENST00000469080 USP30Q70CQ3 517 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 OR11H7Q8NGC8 314 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 TSSK6Q9BXA6 273 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 SPRTNQ9H040 489 aaPredicted RBP11.43□□□□□ -0.58
USP11-206ENST00000469080 PCBD2Q9H0N5 130 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 LMAN1LQ9HAT1 526 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 SPACA6W5XKT8 324 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 H0YGG7 62 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 AIPO00170 330 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 P2RX6O15547 441 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 FBP1P09467 338 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 ITGAMP11215 1152 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 GZMMP51124 257 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 C21orf58P58505 322 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 SPCS3P61009 180 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 CXCR4P61073 352 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 ARF3P61204 181 aaPredicted RBP11.43□□□□□ -0.58
USP11-206ENST00000469080 HNRNPA0Q13151 305 aaKnown RBP11.43□□□□□ -0.58
USP11-206ENST00000469080 ZNF528Q3MIS6 628 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 OR2G6Q5TZ20 316 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 GPR155Q7Z3F1 870 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 CCDC71Q8IV32 467 aaPredicted RBP11.43□□□□□ -0.58
USP11-206ENST00000469080 MS4A6EQ96DS6 147 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 C7orf34Q96L11 122 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 LRR1Q96L50 414 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 SEMA4CQ9C0C4 833 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 WNT5BQ9H1J7 359 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 DZANK1Q9NVP4 752 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 WSB2Q9NYS7 404 aaPredicted RBP11.43□□□□□ -0.58
USP11-206ENST00000469080 SPIN1Q9Y657 262 aaPredicted RBP11.43□□□□□ -0.58
USP11-206ENST00000469080 MTCL1Q9Y4B5 1905 aaKnown RBP11.43□□□□□ -0.58
USP11-206ENST00000469080 C1orf226A1L170 272 aa11.43□□□□□ -0.58
USP11-206ENST00000469080 FOXE1O00358 373 aaPredicted RBP11.43□□□□□ -0.58
USP11-206ENST00000469080 LCN1P31025 176 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms