RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 LIPHQ8WWY8 451 aa16.15■□□□□ 0.18
LMNA-208ENST00000448611 NACC2Q96BF6 587 aa16.15■□□□□ 0.18
LMNA-208ENST00000448611 SLIRPQ9GZT3 109 aaKnown RBP16.15■□□□□ 0.18
LMNA-208ENST00000448611 RNF167Q9H6Y7 350 aa16.15■□□□□ 0.18
LMNA-208ENST00000448611 NDUFB11Q9NX14 153 aa16.15■□□□□ 0.18
LMNA-208ENST00000448611 SCO2O43819 266 aa16.14■□□□□ 0.17
LMNA-208ENST00000448611 NOS3P29474 1203 aa16.14■□□□□ 0.17
LMNA-208ENST00000448611 CRMP1Q14194 572 aa16.14■□□□□ 0.17
LMNA-208ENST00000448611 TOMM34Q15785 309 aaPredicted RBP16.14■□□□□ 0.17
LMNA-208ENST00000448611 ZNF74Q16587 644 aa16.14■□□□□ 0.17
LMNA-208ENST00000448611 FAM199XQ6PEV8 388 aaPredicted RBP16.14■□□□□ 0.17
LMNA-208ENST00000448611 B3GLCTQ6Y288 498 aa16.14■□□□□ 0.17
LMNA-208ENST00000448611 PHC2Q8IXK0 858 aa16.14■□□□□ 0.17
LMNA-208ENST00000448611 SIRT6Q8N6T7 355 aa16.14■□□□□ 0.17
LMNA-208ENST00000448611 OR5W2Q8NH69 310 aa16.14■□□□□ 0.17
LMNA-208ENST00000448611 THAP3Q8WTV1 239 aaPredicted RBP16.14■□□□□ 0.17
LMNA-208ENST00000448611 TM9SF4Q92544 642 aa16.14■□□□□ 0.17
LMNA-208ENST00000448611 ERMAPQ96PL5 475 aaPredicted RBP16.14■□□□□ 0.17
LMNA-208ENST00000448611 DEPDC7Q96QD5 511 aa16.14■□□□□ 0.17
LMNA-208ENST00000448611 PLGRKTQ9HBL7 147 aa16.14■□□□□ 0.17
LMNA-208ENST00000448611 C19orf25Q9UFG5 118 aaPredicted RBP16.14■□□□□ 0.17
LMNA-208ENST00000448611 NXT1Q9UKK6 140 aaKnown RBP16.14■□□□□ 0.17
LMNA-208ENST00000448611 COL27A1Q8IZC6 1860 aaPredicted RBP16.14■□□□□ 0.17
LMNA-208ENST00000448611 ZC3H12DA2A288 527 aaKnown RBP16.13■□□□□ 0.17
LMNA-208ENST00000448611 CCDC182A6NF36 153 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 GPX5O75715 221 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 ZNF3P17036 446 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 SLC2A5P22732 501 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 ITPKBP27987 946 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 CD79BP40259 229 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 BMXP51813 675 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 RPS3AP61247 264 aaKnown RBP16.13■□□□□ 0.17
LMNA-208ENST00000448611 EFR3AQ14156 821 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 FAM69BQ5VUD6 431 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 LINC00299Q6ZSB3 139 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 LHFPL3Q86UP9 236 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 IGFN1Q86VF2 1251 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 PSD4Q8NDX1 1056 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 ISYNA1Q9NPH2 558 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 TNFRSF10DQ9UBN6 386 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 GPR179Q6PRD1 2367 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 WWP2O00308 870 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 GMFGO60234 142 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 KLK3P07288 261 aaPredicted RBP16.13■□□□□ 0.17
LMNA-208ENST00000448611 CPEP16870 476 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 PGCP20142 388 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 CCKBRP32239 447 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 NBL1P41271 181 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 SERPINB10P48595 397 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 P2RX1P51575 399 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.13■□□□□ 0.17
LMNA-208ENST00000448611 DBPQ10586 325 aaPredicted RBP16.13■□□□□ 0.17
LMNA-208ENST00000448611 TMED1Q13445 227 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 ARMC4Q5T2S8 1044 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 FAM198BQ6UWH4 519 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 DPY19L2P2Q6ZN68 376 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 NUP54Q7Z3B4 507 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 ADCK1Q86TW2 530 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 CYB561A3Q8NBI2 242 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 KBTBD8Q8NFY9 601 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 OR51G2Q8NGK0 314 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 OR5L2Q8NGL0 311 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 GATAD2BQ8WXI9 593 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 DACH2Q96NX9 599 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 MOGAT1Q96PD6 335 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 GPX7Q96SL4 187 aaPredicted RBP16.13■□□□□ 0.17
LMNA-208ENST00000448611 ARHGAP9Q9BRR9 750 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 MMP25Q9NPA2 562 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 NRIP3Q9NQ35 241 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 ERVK13-1Q9NX77 482 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 IER3IP1Q9Y5U9 82 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 MUC6Q6W4X9 2439 aa16.13■□□□□ 0.17
LMNA-208ENST00000448611 LOC102723996A0A087X1L8 192 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 SLC22A31A6NKX4 558 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 CDC40O60508 579 aaKnown RBP eCLIP16.12■□□□□ 0.17
LMNA-208ENST00000448611 IFNGP01579 166 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 PAICSP22234 425 aaKnown RBP16.12■□□□□ 0.17
LMNA-208ENST00000448611 ATP6V1E1P36543 226 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 FBXW4P57775 412 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 PRPS1P60891 318 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 CBFBQ13951 182 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 ZNF829Q3KNS6 432 aaPredicted RBP16.12■□□□□ 0.17
LMNA-208ENST00000448611 GXYLT1Q4G148 440 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 KLHL12Q53G59 568 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 LIPKQ5VXJ0 399 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 ZNF517Q6ZMY9 492 aaPredicted RBP16.12■□□□□ 0.17
LMNA-208ENST00000448611 HGDQ93099 445 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 SECISBP2Q96T21 854 aaKnown RBP16.12■□□□□ 0.17
LMNA-208ENST00000448611 TEAD3Q99594 435 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 ULBP3Q9BZM4 244 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 SEC14L4Q9UDX3 406 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 GPN3Q9UHW5 284 aaPredicted RBP16.12■□□□□ 0.17
LMNA-208ENST00000448611 HIF3AQ9Y2N7 669 aa16.12■□□□□ 0.17
LMNA-208ENST00000448611 B4E171 279 aa16.11■□□□□ 0.17
LMNA-208ENST00000448611 ARPC3O15145 178 aa16.11■□□□□ 0.17
LMNA-208ENST00000448611 ASAH2BP0C7U1 165 aa16.11■□□□□ 0.17
LMNA-208ENST00000448611 CLUP10909 449 aa16.11■□□□□ 0.17
LMNA-208ENST00000448611 HIST1H1CP16403 213 aaKnown RBP16.11■□□□□ 0.17
LMNA-208ENST00000448611 NAGAP17050 411 aa16.11■□□□□ 0.17
LMNA-208ENST00000448611 OPRL1P41146 370 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms