RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SURF4O15260 269 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 CSF2RAP15509 400 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 PPT1P50897 306 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 TAS2R30P59541 319 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 DSC1Q08554 894 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 OR7A5Q15622 319 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SSX2Q16385 188 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 MPEG1Q2M385 716 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 HNRNPA1L2Q32P51 320 aaKnown RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 ACTBL2Q562R1 376 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SFXN4Q6P4A7 337 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SBSNQ6UWP8 590 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 COX15Q7KZN9 410 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 ENTHD1Q8IYW4 607 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 CPXM2Q8N436 756 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 MACROD1Q9BQ69 325 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 APOOQ9BUR5 198 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 HCAR1Q9BXC0 346 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 KLF16Q9BXK1 252 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 LINC00597Q9H2U6 94 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 RAB9BQ9NP90 201 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 VSX1Q9NZR4 365 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 POLHQ9Y253 713 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 A0A1W2PPV4 95 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 ACOD1A6NK06 481 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 B4DXG7 233 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 K7EPK0 472 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SGK494L7N484 410 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SULT2B1O00204 365 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 TNFRSF10AO00220 468 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 PIP5K1CO60331 668 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 GPR75O95800 540 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 FUCA1P04066 466 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 OR2T7P0C7T2 308 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 HTR3AP46098 478 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 CSNK1A1P48729 337 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 EFNA3P52797 238 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 TAS2R46P59540 309 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SIRPAP78324 504 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 RPP30P78346 268 aaKnown RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 GPLD1P80108 840 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 CHRNEQ04844 493 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 TNK1Q13470 666 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SLC9A3R2Q15599 337 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 TRNP1Q6NT89 227 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 IDO2Q6ZQW0 420 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 MAVSQ7Z434 540 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 FAM71E2Q8N5Q1 922 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 IL22RA1Q8N6P7 574 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 OR2T27Q8NH04 317 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 GCDHQ92947 438 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 OR5M11Q96RB7 305 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SAMD10Q9BYL1 202 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SIAEQ9HAT2 523 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SLC6A20Q9NP91 592 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 NRIP3Q9NQ35 241 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 FAM212BQ9NTI7 297 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 ITGB2P05107 769 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 OR8G3PP0DMU2 310 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 CTSAP10619 480 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 CPMP14384 443 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 CR2P20023 1033 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 PCSK6P29122 969 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 RPS15P62841 145 aaKnown RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 DEFA6Q01524 100 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 EXOSC7Q15024 291 aaKnown RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 EXOSC6Q5RKV6 272 aaKnown RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 TRAPPC6BQ86SZ2 158 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 OR13C2Q8NGS9 318 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 LGALS14Q8TCE9 139 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 ST7LQ8TDW4 575 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SLC38A5Q8WUX1 472 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 GHSRQ92847 366 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 ADOQ96SZ5 270 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 UBQLN4Q9NRR5 601 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 BOLA1Q9Y3E2 137 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 RAB19A4D1S5 217 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 I6L893 689 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 TNFSF12O43508 249 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 STK17BO94768 372 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 KCNK5O95279 499 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SHC1P29353 583 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SSTP61278 116 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 ACY1Q03154 408 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 PRDX1Q06830 199 aaKnown RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 PDE7AQ13946 482 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 ADPRMQ3LIE5 342 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 PKDCCQ504Y2 493 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 MRPL2Q5T653 305 aaKnown RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 NXNL2Q5VZ03 156 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 PRR18Q8N4B5 295 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 FAM160A2Q8N612 972 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 OR2T11Q8NH01 316 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 MIB2Q96AX9 1013 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SFXN2Q96NB2 322 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 ZNF582Q96NG8 517 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-204ENST00000448183 SMIM14Q96QK8 99 aa7.26□□□□□ -1.25
NEDD9-204ENST00000448183 PAPOLGQ9BWT3 736 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms