RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 IFNGP01579 166 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 GYPBP06028 91 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 HIST1H1CP16403 213 aaKnown RBP16.76■□□□□ 0.27
CCDC43-201ENST00000315286 TMED1Q13445 227 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 ZNF322Q6U7Q0 402 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-201ENST00000315286 C16orf47Q6ZP98 133 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-201ENST00000315286 OVCH1Q7RTY7 1134 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 PPP1R3BQ86XI6 285 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 SNX29P2Q8IUI4 249 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 C17orf47Q8NEP4 570 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 C1GALT1C1Q96EU7 318 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 TMEM43Q9BTV4 400 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 ISG20L2Q9H9L3 353 aaKnown RBP16.76■□□□□ 0.27
CCDC43-201ENST00000315286 A0A1W2PQD3 144 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 ALOX12BO75342 701 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 TACR3P29371 465 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 RPL4P36578 427 aaKnown RBP16.76■□□□□ 0.27
CCDC43-201ENST00000315286 EGR4Q05215 589 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 ARMC4Q5T2S8 1044 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 C22orf42Q6IC83 251 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 LCN10Q6JVE6 187 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 Q6ZNX1 250 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 TMEM105Q8N8V8 129 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 APCDD1LQ8NCL9 501 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 NFAM1Q8NET5 270 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-201ENST00000315286 SDR9C7Q8NEX9 313 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 CEP76Q8TAP6 659 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 DEPDC7Q96QD5 511 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 GFM1Q96RP9 751 aaKnown RBP16.76■□□□□ 0.27
CCDC43-201ENST00000315286 TIMP4Q99727 224 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 CTRCQ99895 268 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 TBL1XR1Q9BZK7 514 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 QPCTLQ9NXS2 382 aa16.76■□□□□ 0.27
CCDC43-201ENST00000315286 NCOR1O75376 2440 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 KHNYNO15037 678 aaKnown RBP16.75■□□□□ 0.27
CCDC43-201ENST00000315286 GDF9O60383 454 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 CER1O95813 267 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 MRPL3P09001 348 aaKnown RBP16.75■□□□□ 0.27
CCDC43-201ENST00000315286 ZNF12P17014 697 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 HOXD12P35452 270 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 SLC6A8P48029 635 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 RPS4XP62701 263 aaKnown RBP16.75■□□□□ 0.27
CCDC43-201ENST00000315286 IFITM3Q01628 133 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 ACSM1Q08AH1 577 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 TOMM34Q15785 309 aaPredicted RBP16.75■□□□□ 0.27
CCDC43-201ENST00000315286 ZNF74Q16587 644 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 DPY19L2P2Q6ZN68 376 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 FAM98AQ8NCA5 519 aaKnown RBP16.75■□□□□ 0.27
CCDC43-201ENST00000315286 OR10H4Q8NGA5 316 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 MOGAT1Q96PD6 335 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 KCNS3Q9BQ31 491 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 GTPBP2Q9BX10 602 aaKnown RBP16.75■□□□□ 0.27
CCDC43-201ENST00000315286 BARHL1Q9BZE3 327 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 SEMA4CQ9C0C4 833 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 ADAM19Q9H013 955 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 NUAK2Q9H093 628 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 SNTG1Q9NSN8 517 aa16.75■□□□□ 0.27
CCDC43-201ENST00000315286 CAB39Q9Y376 341 aaPredicted RBP16.75■□□□□ 0.27
CCDC43-201ENST00000315286 VSTM2BA6NLU5 285 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 SULT1C4O75897 302 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 SBK2P0C263 348 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 ITPKBP27987 946 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 GABRA5P31644 462 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 EMP2P54851 167 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 LPAL2Q16609 132 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 CRTC2Q53ET0 693 aaPredicted RBP16.74■□□□□ 0.27
CCDC43-201ENST00000315286 KLBQ86Z14 1044 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 C10orf53Q8N6V4 93 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 MOSPD2Q8NHP6 518 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 SMAP2Q8WU79 429 aaPredicted RBP16.74■□□□□ 0.27
CCDC43-201ENST00000315286 ALG8Q9BVK2 526 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 ADGRL4Q9HBW9 690 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 NRIP3Q9NQ35 241 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 DAPL1A0PJW8 107 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 HTR3EA5X5Y0 456 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 SAGE2PA6NJ88 616 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 SLC30A4O14863 429 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 AKAP8O43823 692 aaKnown RBP16.74■□□□□ 0.27
CCDC43-201ENST00000315286 FADS1O60427 444 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 EIF4E2O60573 245 aaKnown RBP16.74■□□□□ 0.27
CCDC43-201ENST00000315286 ONECUT2O95948 504 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 IGF2P01344 180 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 CELP19835 753 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 S100A5P33763 92 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 GRK6P43250 576 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 FABP5Q01469 135 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 LTBQ06643 244 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 SLC23A3Q6PIS1 610 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 METTL21AQ8WXB1 218 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 KTI12Q96EK9 354 aaPredicted RBP16.74■□□□□ 0.27
CCDC43-201ENST00000315286 AKIRIN1Q9H9L7 192 aaPredicted RBP16.74■□□□□ 0.27
CCDC43-201ENST00000315286 MMP25Q9NPA2 562 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 HAO2Q9NYQ3 351 aa16.74■□□□□ 0.27
CCDC43-201ENST00000315286 BLOC1S5-TXNDC5H3BN57 136 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 SCO2O43819 266 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 ZNF354AO60765 605 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-201ENST00000315286 CDRT1O95170 752 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 EVI2BP34910 448 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 PPP5CP53041 499 aa16.73■□□□□ 0.27
CCDC43-201ENST00000315286 ERVK-25P63136 954 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms