RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 PCDHGB4Q9UN71 923 aa11.76□□□□□ -0.53
HMGB1P24-201ENST00000611897 SPIN1Q9Y657 262 aaPredicted RBP11.76□□□□□ -0.53
HMGB1P24-201ENST00000611897 MALRD1Q5VYJ5 2156 aa11.76□□□□□ -0.53
HMGB1P24-201ENST00000611897 YLPM1P49750 1951 aaKnown RBP11.76□□□□□ -0.53
HMGB1P24-201ENST00000611897 DUXAA6NLW8 204 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 MRPL33O75394 65 aaKnown RBP11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 CPSF4O95639 269 aaKnown RBP11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 AK1P00568 194 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 OR12D1P0DN82 309 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 CDH2P19022 906 aaPredicted RBP11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 PTAFRP25105 342 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 CD40P25942 277 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 ARRB2P32121 409 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 ZNF141Q15928 474 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 MAPK14Q16539 360 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 ATAD3BQ5T9A4 648 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 C11orf71Q6IPW1 123 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 DNAJC14Q6Y2X3 702 aaPredicted RBP11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 MTDHQ86UE4 582 aaKnown RBP11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 P2RY8Q86VZ1 359 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 OR52E4Q8NGH9 312 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 PIGXQ8TBF5 258 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 TCP10LQ8TDR4 215 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 FAM168AQ92567 244 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 DHRS9Q9BPW9 319 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 ZNF350Q9GZX5 532 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 TAS2R16Q9NYV7 291 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 UPB1Q9UBR1 384 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 ZDHHC2Q9UIJ5 367 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 MGAT4BQ9UQ53 548 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 WDR45Q9Y484 360 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 SLC25A15Q9Y619 301 aa11.75□□□□□ -0.53
HMGB1P24-201ENST00000611897 CUBNO60494 3623 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 CLDN24A6NM45 220 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 ZNF716A6NP11 495 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 KIAA0513O60268 411 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 PGM3O95394 542 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 THBS1P07996 1170 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 FAM157CP0CG43 387 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 IFFO1Q0D2I5 559 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 CARTPTQ16568 116 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 ARHGAP11BQ3KRB8 267 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 GPAT3Q53EU6 434 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 RIMKLAQ8IXN7 391 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 C3orf49Q96BT1 292 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 TNFRSF13CQ96RJ3 184 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 CCDC106Q9BWC9 280 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 BEX2Q9BXY8 128 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 CHODLQ9H9P2 273 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 MKS1Q9NXB0 559 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 NOP53Q9NZM5 478 aaKnown RBP11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 CDC42EP3Q9UKI2 254 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 SLC35A3Q9Y2D2 325 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 ARFGEF3Q5TH69 2177 aa11.74□□□□□ -0.53
HMGB1P24-201ENST00000611897 IGKV3D-15A0A087WSY6 115 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 ATP6V1G2-DDX39BF2Z307 99 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 ETV2O00321 342 aaPredicted RBP11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 GPR171O14626 319 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 PMS2P2O95744 297 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 ITGA5P08648 1049 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 CHI3L1P36222 383 aaPredicted RBP11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 APOBEC1P41238 236 aaKnown RBP11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 MAGEA8P43361 318 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 KHKP50053 298 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 CLDN8P56748 225 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 DSCR9P59020 149 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 SRSF2Q01130 221 aaKnown RBP11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 MAD2L1Q13257 205 aaPredicted RBP11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 GGTLC2Q14390 218 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 TYW3Q6IPR3 259 aaKnown RBP11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 EMBQ6PCB8 327 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 KLHL24Q6TFL4 600 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 IL17RELQ6ZVW7 336 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 SSX8Q7RTT4 187 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 GRINAQ7Z429 371 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 HOMEZQ8IX15 550 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 ARFGAP2Q8N6H7 521 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 OR10H5Q8NGA6 315 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 ROPN1LQ96C74 230 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 FBXO17Q96EF6 278 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 PKNOX2Q96KN3 472 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 INPP5KQ9BT40 448 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 GRIP2Q9C0E4 1043 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 SHARPINQ9H0F6 387 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 MALT1Q9UDY8 824 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 NBEAL1Q6ZS30 2694 aa11.73□□□□□ -0.53
HMGB1P24-201ENST00000611897 A0A096LNT2 108 aa11.72□□□□□ -0.53
HMGB1P24-201ENST00000611897 WDR91A4D1P6 747 aa11.72□□□□□ -0.53
HMGB1P24-201ENST00000611897 AP3D1O14617 1153 aa11.72□□□□□ -0.53
HMGB1P24-201ENST00000611897 ANKRD28O15084 1053 aa11.72□□□□□ -0.53
HMGB1P24-201ENST00000611897 SLC25A16P16260 332 aa11.72□□□□□ -0.53
HMGB1P24-201ENST00000611897 NTF4P34130 210 aa11.72□□□□□ -0.53
HMGB1P24-201ENST00000611897 PGM1P36871 562 aa11.72□□□□□ -0.53
HMGB1P24-201ENST00000611897 IDH2P48735 452 aaKnown RBP11.72□□□□□ -0.53
HMGB1P24-201ENST00000611897 SLC25A3Q00325 362 aa11.72□□□□□ -0.53
HMGB1P24-201ENST00000611897 CHRNB3Q05901 458 aa11.72□□□□□ -0.53
HMGB1P24-201ENST00000611897 FUT5Q11128 374 aa11.72□□□□□ -0.53
HMGB1P24-201ENST00000611897 GABRA6Q16445 453 aa11.72□□□□□ -0.53
HMGB1P24-201ENST00000611897 OR7E24Q6IFN5 339 aa11.72□□□□□ -0.53
HMGB1P24-201ENST00000611897 FRRS1Q6ZNA5 592 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms