RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Nid1P10493 1245 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Epha4Q03137 986 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Apoc2Q05020 97 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Ebf1Q07802 591 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Gal3st2cQ3ULK5 396 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Apex2Q68G58 516 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Fmr1nbQ80ZA7 238 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Znf689Q8BKK5 500 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Vmn1r228Q8R2A7 333 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Slc24a3Q99PD7 645 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Eny2Q9JIX0 101 aaKnown RBP13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Hacl1Q9QXE0 581 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Zfp934K7N6H3 473 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 BC117090L7N257 96 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Syt3O35681 587 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Fcn1O70165 334 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 OmgQ63912 440 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Tbccd1Q640P7 552 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Zfp866Q6PGD2 520 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Slc2a10Q8VHD6 536 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Zfp65Q91W94 390 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Emc3Q99KI3 261 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 CrtapQ9CYD3 400 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Ccdc167Q9D162 97 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Kcnd3Q9Z0V1 655 aa13.35□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Kiaa0100Q5SYL3 2234 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 IsxA1A546 240 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Skint4A7TZF3 474 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Fam71f1Q3UZD7 341 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Vmn1r223Q5SSA0 361 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Dyrk2Q5U4C9 599 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Kctd12Q6WVG3 327 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Q80Y39 304 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Vmn1r234Q8R298 329 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Vmn1r231Q8R2A3 311 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Itfg2Q91WI7 443 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Rtn4ip1Q924D0 396 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Prmt1Q9JIF0 371 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Gm5519D3Z175 170 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Gm8225D3Z536 292 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Gm17026K7N6Z0 213 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Gpld1O70362 837 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Hoxd12P23812 268 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Apobec1P51908 229 aaKnown RBP13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Rab2bP59279 216 aaKnown RBP13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Lgals3bpQ07797 577 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 InipQ3TXT3 104 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Pgap1Q3UUQ7 922 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 ShhQ62226 437 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Lcn3Q62471 182 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Slc6a5Q761V0 799 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Spaca9Q7TPM5 168 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Arl6ip5Q8R5J9 188 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Olfr1280Q8VGG8 305 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Rab3bQ9CZT8 219 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Wdr83Q9DAJ4 315 aaKnown RBP13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 CalyQ9DCA7 226 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Spag4Q9JJF2 443 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Iglc4A0A0G2JEK5 104 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Zfp993A2A8V4 313 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 P06321 130 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Stfa2P35174 103 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 PdxpP60487 292 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 BidP70444 195 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Ext1P97464 746 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 BmxP97504 651 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Klhl13Q80TF4 654 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Rims3Q80U57 307 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 CyrenQ8BHZ5 157 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Fndc9Q8BJN4 226 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 PigtQ8BXQ2 582 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Chchd4Q8VEA4 139 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Cmtm3Q99LJ5 184 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Arl5bQ9D4P0 179 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Rp2Q9EPK2 347 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Olfr937Q9EQB4 311 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Kntc1Q8C3Y4 2207 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Prdx4O08807 274 aaKnown RBP13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 VaspP70460 375 aaKnown RBP13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Crtc2Q3U182 692 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 LpoQ5SW46 710 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Dvl3Q61062 716 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Alg8Q6P8H8 526 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Olfr787Q7TRI1 312 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Adipor2Q8BQS5 386 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 MdficQ8BX65 247 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Lrrtm3Q8BZ81 582 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Gpn1Q8VCE2 372 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Olfr1378Q8VGH0 315 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Spns3Q9D232 514 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Trappc6bQ9D289 158 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Acot12Q9DBK0 556 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Cd302Q9DCG2 228 aa13.34□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Col4a1P02463 1669 aa13.33□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Gon4lQ9DB00 2260 aa13.33□□□□□ -0.27
Col2a1-202ENSMUST00000088355 S100a11P50543 98 aaKnown RBP13.33□□□□□ -0.28
Col2a1-202ENSMUST00000088355 Cdh10P70408 788 aa13.33□□□□□ -0.28
Col2a1-202ENSMUST00000088355 Tmem104Q3TB48 496 aa13.33□□□□□ -0.28
Col2a1-202ENSMUST00000088355 Ubtd2Q6PGH0 234 aa13.33□□□□□ -0.28
Col2a1-202ENSMUST00000088355 Trim46Q7TNM2 759 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 93.3 ms