Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Vmn1r228Q8R2A7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28,95■■■□□ 2,23
Vmn1r228Q8R2A7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28,82■■■□□ 2,2
Vmn1r228Q8R2A7 Psd-208ENSMUST00000224556 2034 ntBASIC28,23■■■□□ 2,11
Vmn1r228Q8R2A7 Gm25239-201ENSMUST00000174915 86 ntBASIC28,19■■■□□ 2,1
Vmn1r228Q8R2A7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28,16■■■□□ 2,1
Vmn1r228Q8R2A7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27,68■■■□□ 2,02
Vmn1r228Q8R2A7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27,32■■□□□ 1,96
Vmn1r228Q8R2A7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27,21■■□□□ 1,95
Vmn1r228Q8R2A7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26,96■■□□□ 1,91
Vmn1r228Q8R2A7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26,89■■□□□ 1,9
Vmn1r228Q8R2A7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26,84■■□□□ 1,89
Vmn1r228Q8R2A7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26,79■■□□□ 1,88
Vmn1r228Q8R2A7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26,59■■□□□ 1,85
Vmn1r228Q8R2A7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,53■■□□□ 1,84
Vmn1r228Q8R2A7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Vmn1r228Q8R2A7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26,3■■□□□ 1,8
Vmn1r228Q8R2A7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26,24■■□□□ 1,79
Vmn1r228Q8R2A7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26,21■■□□□ 1,79
Vmn1r228Q8R2A7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26,07■■□□□ 1,76
Vmn1r228Q8R2A7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26,05■■□□□ 1,76
Vmn1r228Q8R2A7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Vmn1r228Q8R2A7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Vmn1r228Q8R2A7 Gm15042-201ENSMUST00000120212 883 ntBASIC25,74■■□□□ 1,71
Vmn1r228Q8R2A7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25,67■■□□□ 1,7
Vmn1r228Q8R2A7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Vmn1r228Q8R2A7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25,52■■□□□ 1,68
Vmn1r228Q8R2A7 Gm42596-201ENSMUST00000196305 1958 ntBASIC25,45■■□□□ 1,66
Vmn1r228Q8R2A7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25,38■■□□□ 1,65
Vmn1r228Q8R2A7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25,38■■□□□ 1,65
Vmn1r228Q8R2A7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25,38■■□□□ 1,65
Vmn1r228Q8R2A7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25,37■■□□□ 1,65
Vmn1r228Q8R2A7 Gm10524-201ENSMUST00000181931 1893 ntBASIC25,37■■□□□ 1,65
Vmn1r228Q8R2A7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25,37■■□□□ 1,65
Vmn1r228Q8R2A7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Vmn1r228Q8R2A7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25,35■■□□□ 1,65
Vmn1r228Q8R2A7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25,34■■□□□ 1,65
Vmn1r228Q8R2A7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25,32■■□□□ 1,64
Vmn1r228Q8R2A7 Gm15045-201ENSMUST00000117359 883 ntBASIC25,32■■□□□ 1,64
Vmn1r228Q8R2A7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Vmn1r228Q8R2A7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Vmn1r228Q8R2A7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25,25■■□□□ 1,63
Vmn1r228Q8R2A7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Vmn1r228Q8R2A7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Vmn1r228Q8R2A7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25,13■■□□□ 1,61
Vmn1r228Q8R2A7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25,08■■□□□ 1,61
Vmn1r228Q8R2A7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25,07■■□□□ 1,6
Vmn1r228Q8R2A7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25,01■■□□□ 1,59
Vmn1r228Q8R2A7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24,98■■□□□ 1,59
Vmn1r228Q8R2A7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24,93■■□□□ 1,58
Vmn1r228Q8R2A7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24,89■■□□□ 1,58
Vmn1r228Q8R2A7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24,83■■□□□ 1,56
Vmn1r228Q8R2A7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24,77■■□□□ 1,56
Vmn1r228Q8R2A7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24,7■■□□□ 1,54
Vmn1r228Q8R2A7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24,62■■□□□ 1,53
Vmn1r228Q8R2A7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24,6■■□□□ 1,53
Vmn1r228Q8R2A7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
Vmn1r228Q8R2A7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24,54■■□□□ 1,52
Vmn1r228Q8R2A7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
Vmn1r228Q8R2A7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24,54■■□□□ 1,52
Vmn1r228Q8R2A7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24,53■■□□□ 1,52
Vmn1r228Q8R2A7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24,53■■□□□ 1,52
Vmn1r228Q8R2A7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24,52■■□□□ 1,52
Vmn1r228Q8R2A7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24,46■■□□□ 1,51
Vmn1r228Q8R2A7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24,43■■□□□ 1,5
Vmn1r228Q8R2A7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24,42■■□□□ 1,5
Vmn1r228Q8R2A7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24,42■■□□□ 1,5
Vmn1r228Q8R2A7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24,35■■□□□ 1,49
Vmn1r228Q8R2A7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24,33■■□□□ 1,49
Vmn1r228Q8R2A7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24,33■■□□□ 1,49
Vmn1r228Q8R2A7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24,32■■□□□ 1,48
Vmn1r228Q8R2A7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24,27■■□□□ 1,48
Vmn1r228Q8R2A7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24,27■■□□□ 1,48
Vmn1r228Q8R2A7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24,25■■□□□ 1,47
Vmn1r228Q8R2A7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24,19■■□□□ 1,46
Vmn1r228Q8R2A7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24,14■■□□□ 1,45
Vmn1r228Q8R2A7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24,13■■□□□ 1,45
Vmn1r228Q8R2A7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24,12■■□□□ 1,45
Vmn1r228Q8R2A7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24,08■■□□□ 1,45
Vmn1r228Q8R2A7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24,07■■□□□ 1,44
Vmn1r228Q8R2A7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1,43
Vmn1r228Q8R2A7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23,95■■□□□ 1,42
Vmn1r228Q8R2A7 Gm24109-201ENSMUST00000175489 103 ntBASIC23,91■■□□□ 1,42
Vmn1r228Q8R2A7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23,89■■□□□ 1,41
Vmn1r228Q8R2A7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23,88■■□□□ 1,41
Vmn1r228Q8R2A7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23,88■■□□□ 1,41
Vmn1r228Q8R2A7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23,88■■□□□ 1,41
Vmn1r228Q8R2A7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23,87■■□□□ 1,41
Vmn1r228Q8R2A7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23,87■■□□□ 1,41
Vmn1r228Q8R2A7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23,86■■□□□ 1,41
Vmn1r228Q8R2A7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23,82■■□□□ 1,4
Vmn1r228Q8R2A7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23,82■■□□□ 1,4
Vmn1r228Q8R2A7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23,79■■□□□ 1,4
Vmn1r228Q8R2A7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23,76■■□□□ 1,39
Vmn1r228Q8R2A7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23,73■■□□□ 1,39
Vmn1r228Q8R2A7 Gm23366-201ENSMUST00000175022 89 ntBASIC23,73■■□□□ 1,39
Vmn1r228Q8R2A7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23,71■■□□□ 1,39
Vmn1r228Q8R2A7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23,7■■□□□ 1,39
Vmn1r228Q8R2A7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23,7■■□□□ 1,38
Vmn1r228Q8R2A7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23,7■■□□□ 1,38
Retrieved 100 of 76,532 protein–RNA pairs in 19,9 ms