RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 PKD1L1Q8TDX9 2849 aa14.11□□□□□ -0.15
USP48-210ENST00000489108 ZNF264O43296 627 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 SEC22BO75396 215 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 HMGN2P05204 90 aaKnown RBP14.1□□□□□ -0.15
USP48-210ENST00000489108 ATP5F1P24539 256 aaPredicted RBP14.1□□□□□ -0.15
USP48-210ENST00000489108 GIFP27352 417 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 FRKP42685 505 aaPredicted RBP14.1□□□□□ -0.15
USP48-210ENST00000489108 PRKAA2P54646 552 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 CDH15P55291 814 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 SESN3P58005 492 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 CSNK2A1P68400 391 aaPredicted RBP14.1□□□□□ -0.15
USP48-210ENST00000489108 LASP1Q14847 261 aaKnown RBP14.1□□□□□ -0.15
USP48-210ENST00000489108 SPATA19Q7Z5L4 167 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 PPCDCQ96CD2 204 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 FAM120BQ96EK7 910 aaKnown RBP14.1□□□□□ -0.15
USP48-210ENST00000489108 L3HYPDHQ96EM0 354 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 STACQ99469 402 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 THUMPD3Q9BV44 507 aaKnown RBP14.1□□□□□ -0.15
USP48-210ENST00000489108 REEP4Q9H6H4 257 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 SERINC1Q9NRX5 453 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 ACSS1Q9NUB1 689 aaPredicted RBP14.1□□□□□ -0.15
USP48-210ENST00000489108 DTNAQ9Y4J8 743 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 KCNE3Q9Y6H6 103 aa14.1□□□□□ -0.15
USP48-210ENST00000489108 B9A039 149 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 NPIPB8E9PQR5 432 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 POC1B-GALNT4F8VUJ3 575 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 NPIPB9F8W1W9 429 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 GPR171O14626 319 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 EIF4E2O60573 245 aaKnown RBP14.09□□□□□ -0.15
USP48-210ENST00000489108 RGS9O75916 674 aaPredicted RBP14.09□□□□□ -0.15
USP48-210ENST00000489108 RSL1D1O76021 490 aaKnown RBP14.09□□□□□ -0.15
USP48-210ENST00000489108 DAOP14920 347 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 DVL1P1P54792 670 aaPredicted RBP14.09□□□□□ -0.15
USP48-210ENST00000489108 PRPS1P60891 318 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 MERTKQ12866 999 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 CBFBQ13951 182 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 SYT14P1Q58G82 188 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 DCST2Q5T1A1 773 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 CCDC103Q8IW40 242 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 C17orf78Q8N4C9 275 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 DCAKDQ8WVC6 231 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 ZNF764Q96H86 408 aaPredicted RBP14.09□□□□□ -0.15
USP48-210ENST00000489108 FUT8Q9BYC5 575 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 RAB1BQ9H0U4 201 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 GSTO2Q9H4Y5 243 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 SLC7A10Q9NS82 523 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 CA10Q9NS85 328 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 SIRT3Q9NTG7 399 aaPredicted RBP14.09□□□□□ -0.15
USP48-210ENST00000489108 ZCCHC3Q9NUD5 404 aaKnown RBP14.09□□□□□ -0.15
USP48-210ENST00000489108 UPB1Q9UBR1 384 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 DCTN4Q9UJW0 460 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 CCL27Q9Y4X3 112 aa14.09□□□□□ -0.15
USP48-210ENST00000489108 NUP214P35658 2090 aaPredicted RBP14.09□□□□□ -0.15
USP48-210ENST00000489108 KLF11O14901 512 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 TBX19O60806 448 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 CYP7B1O75881 506 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 SNUPNO95149 360 aaKnown RBP14.08□□□□□ -0.16
USP48-210ENST00000489108 OR4A8P0C604 315 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 TFPIP10646 304 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 IDH3GP51553 393 aaPredicted RBP14.08□□□□□ -0.16
USP48-210ENST00000489108 LGALS3BPQ08380 585 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 TRIP10Q15642 601 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 PDLIM3Q53GG5 364 aaPredicted RBP14.08□□□□□ -0.16
USP48-210ENST00000489108 DEF8Q6ZN54 512 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 SLC22A9Q8IVM8 553 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 ZCCHC24Q8N2G6 241 aaKnown RBP14.08□□□□□ -0.16
USP48-210ENST00000489108 CCNYL1Q8N7R7 359 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 C1orf162Q8NEQ5 155 aaPredicted RBP14.08□□□□□ -0.16
USP48-210ENST00000489108 TSSK3Q96PN8 268 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 PLK3Q9H4B4 646 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 RRAGDQ9NQL2 400 aaPredicted RBP14.08□□□□□ -0.16
USP48-210ENST00000489108 ZDHHC18Q9NUE0 388 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 BAIAP2L1Q9UHR4 511 aa14.08□□□□□ -0.16
USP48-210ENST00000489108 FAM157AC9JC47 383 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 DNAJA2O60884 412 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 WNT11O96014 354 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 UBL4AP11441 157 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 PGCP20142 388 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 SLC16A1P53985 500 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 SLC7A5Q01650 507 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 ADIPOQQ15848 244 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 TSPO2Q5TGU0 170 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 VHLLQ6RSH7 139 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 CASP12Q6UXS9 341 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 PEG10Q86TG7 708 aaKnown RBP14.07□□□□□ -0.16
USP48-210ENST00000489108 CLHC1Q8NHS4 586 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 PIGXQ8TBF5 258 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 ADAMTS15Q8TE58 950 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 FAM216AQ8WUB2 273 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 ST8SIA1Q92185 356 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 ZHX1-C8orf76Q96EF9 292 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 ARL5BQ96KC2 179 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 LAT2Q9GZY6 243 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 KCNF1Q9H3M0 494 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 TNFRSF12AQ9NP84 129 aa14.07□□□□□ -0.16
USP48-210ENST00000489108 IGHV1-18A0A0C4DH31 117 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 SNRPAP09012 282 aaKnown RBP14.06□□□□□ -0.16
USP48-210ENST00000489108 CREB1P16220 341 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 CDH2P19022 906 aaPredicted RBP14.06□□□□□ -0.16
USP48-210ENST00000489108 PCMT1P22061 227 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms