RNA–Protein interactions for RNA: ENST00000437607.1

PTPRF-208, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 788 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-208ENST00000437607 RNF144AP50876 292 aaPredicted RBP11.02□□□□□ -0.65
PTPRF-208ENST00000437607 FBXW4P57775 412 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 EEF1A1P68104 462 aaKnown RBP11.02□□□□□ -0.65
PTPRF-208ENST00000437607 KCNJ10P78508 379 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 PLGLB1Q02325 96 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 RIPK1Q13546 671 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 FGFBP1Q14512 234 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 MAPK14Q16539 360 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 DEF8Q6ZN54 512 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 RANBP3LQ86VV4 465 aaPredicted RBP11.02□□□□□ -0.65
PTPRF-208ENST00000437607 CYP4Z1Q86W10 505 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 TMEM251Q8N6I4 163 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 TMCO5AQ8N6Q1 288 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 CHID1Q9BWS9 393 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 CXXC4Q9H2H0 198 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 LIME1Q9H400 295 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 METTL7AQ9H8H3 244 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 KLRF1Q9NZS2 232 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 Q9UFV3 132 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 SH3GLB1Q9Y371 365 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 DTNAQ9Y4J8 743 aa11.02□□□□□ -0.65
PTPRF-208ENST00000437607 A0A1W2PQD3 144 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 OR14I1A6ND48 311 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 H3BNX3 289 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 hCG_2039718K7EN88 272 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 ACOT7O00154 380 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 DEAF1O75398 565 aaPredicted RBP11.01□□□□□ -0.65
PTPRF-208ENST00000437607 CYP7B1O75881 506 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 SEMG1P04279 462 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 ENDOUP21128 410 aaKnown RBP11.01□□□□□ -0.65
PTPRF-208ENST00000437607 CNR1P21554 472 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 TBXA2RP21731 343 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 FASP25445 335 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 MAGEA2P43356 314 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 DNASE1L1P49184 302 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 CCR4P51679 360 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 SESN3P58005 492 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 FOXO1Q12778 655 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 MYBPHQ13203 477 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 NTRK2Q16620 822 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 NRF1Q16656 503 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 DUSP7Q16829 419 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 GLIPR1L2Q4G1C9 344 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 ZNF585AQ6P3V2 769 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 LYPD8Q6UX82 237 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 TRILQ7L0X0 811 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 NUP54Q7Z3B4 507 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 MISPQ8IVT2 679 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 ZNF440Q8IYI8 595 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 PQLC1Q8N2U9 271 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 GATSQ8NAP1 163 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 PAPD5Q8NDF8 572 aaKnown RBP11.01□□□□□ -0.65
PTPRF-208ENST00000437607 OR10G3Q8NGC4 313 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 OR4C3Q8NH37 302 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 PHOSPHO1Q8TCT1 267 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 HGDQ93099 445 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 SLCO4A1Q96BD0 722 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 ARHGDIGQ99819 225 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 FAM173AQ9BQD7 235 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 OSBPL11Q9BXB4 747 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 HHATLQ9HCP6 504 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 FLRT3Q9NZU0 649 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 C6orf203Q9P0P8 240 aaPredicted RBP11.01□□□□□ -0.65
PTPRF-208ENST00000437607 TESQ9UGI8 421 aaKnown RBP11.01□□□□□ -0.65
PTPRF-208ENST00000437607 KCNE5Q9UJ90 142 aa11.01□□□□□ -0.65
PTPRF-208ENST00000437607 FAM32AQ9Y421 112 aaKnown RBP11.01□□□□□ -0.65
PTPRF-208ENST00000437607 CDHR4A6H8M9 788 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 CLDN24A6NM45 220 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 ALG1L2C9J202 215 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 GTPBP1O00178 669 aaKnown RBP11□□□□□ -0.65
PTPRF-208ENST00000437607 AQP7O14520 342 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 GNGT2O14610 69 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 AP3D1O14617 1153 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 BCKDKO14874 412 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 ADAMDEC1O15204 470 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 FRS3O43559 492 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 NDUFB5O43674 189 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 CTAG2O75638 210 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 LGI1O95970 557 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 CST1P01037 141 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 UBTFL6P0CB48 400 aaPredicted RBP11□□□□□ -0.65
PTPRF-208ENST00000437607 CCL3P10147 92 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 CD99P14209 185 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 UQCRBP14927 111 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 ANPEPP15144 967 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 IFNA8P32881 189 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 OR1E2P47887 323 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 VLDLRP98155 873 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 SPIBQ01892 262 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 SNTB1Q13884 538 aaKnown RBP11□□□□□ -0.65
PTPRF-208ENST00000437607 HYAL4Q2M3T9 481 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 ZNF791Q3KP31 576 aaPredicted RBP11□□□□□ -0.65
PTPRF-208ENST00000437607 KLHL26Q53HC5 615 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 FBXW10Q5XX13 1052 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 AP1ARQ63HQ0 302 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 B3GNT6Q6ZMB0 384 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 RTL4Q6ZR62 310 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 PLEKHM3Q6ZWE6 761 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 ZNF550Q7Z398 422 aa11□□□□□ -0.65
PTPRF-208ENST00000437607 SLC22A16Q86VW1 577 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms