RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 IL5RAQ01344 420 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 ACSM5Q6NUN0 579 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 OPN5Q6U736 354 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 RAB43Q86YS6 212 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 FADS6Q8N9I5 356 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 DPH1Q9BZG8 443 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 RPS6KB2Q9UBS0 482 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 TMEM5Q9Y2B1 443 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 WIF1Q9Y5W5 379 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 UNC119BA6NIH7 251 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 CDC40O60508 579 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRIM39-204ENST00000396548 TSPAN19P0C672 248 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 LIPCP11150 499 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 IFI30P13284 250 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 PGCP20142 388 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 WDSUB1Q8N9V3 476 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 ANGPTL4Q9BY76 406 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 ENKD1Q9H0I2 346 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 KRCC1Q9NPI7 259 aaPredicted RBP11.57□□□□□ -0.56
TRIM39-204ENST00000396548 SIGLEC7Q9Y286 467 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 A6NHS1 94 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 SLC1A7O00341 560 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 HTR1AP08908 422 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 SNRPGP62308 76 aaKnown RBP11.56□□□□□ -0.56
TRIM39-204ENST00000396548 SLC25A53Q5H9E4 307 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 SLC25A30Q5SVS4 291 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 JMJD6Q6NYC1 403 aaPredicted RBP11.56□□□□□ -0.56
TRIM39-204ENST00000396548 RRM2BQ7LG56 351 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 P3H2Q8IVL5 708 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 TMCO5AQ8N6Q1 288 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 OR4Q3Q8NH05 313 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 IP6K3Q96PC2 410 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 NPAS1Q99742 590 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 PLCXD1Q9NUJ7 323 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 FKBP14Q9NWM8 211 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 SCOCQ9UIL1 159 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 OSGIN1Q9UJX0 560 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 CDH10Q9Y6N8 788 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 DOCK10Q96BY6 2186 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 NPIPB7O75200 414 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 CCDC159P0C7I6 412 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 TACR3P29371 465 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 HLCSP50747 726 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 QPRTQ15274 297 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 SMN1Q16637 294 aaKnown RBP11.56□□□□□ -0.56
TRIM39-204ENST00000396548 DCAF10Q5QP82 559 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 TMEM201Q5SNT2 666 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 B3GNTL1Q67FW5 361 aaPredicted RBP11.56□□□□□ -0.56
TRIM39-204ENST00000396548 IQCF1Q8N6M8 205 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 TSPAN14Q8NG11 270 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 FAM81AQ8TBF8 368 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 SGCDQ92629 289 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 SIGLEC11Q96RL6 698 aa11.56□□□□□ -0.56
TRIM39-204ENST00000396548 MRPS26Q9BYN8 205 aaKnown RBP11.56□□□□□ -0.56
TRIM39-204ENST00000396548 TUBA8Q9NY65 449 aaPredicted RBP11.56□□□□□ -0.56
TRIM39-204ENST00000396548 HTR3EA5X5Y0 456 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 ANKRD33BA6NCL7 494 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 M0R129 80 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 KPNA4O00629 521 aaPredicted RBP11.55□□□□□ -0.56
TRIM39-204ENST00000396548 TFAP2AP05549 437 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 PRKCAP17252 672 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 ST13P50502 369 aaKnown RBP11.55□□□□□ -0.56
TRIM39-204ENST00000396548 GABARAPL2P60520 117 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 GINS1Q14691 196 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 SLC30A6Q6NXT4 461 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 IL20RBQ6UXL0 311 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 ADGRG3Q86Y34 549 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 ASB15Q8WXK1 588 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 MYCBPQ99417 103 aaPredicted RBP11.55□□□□□ -0.56
TRIM39-204ENST00000396548 ING2Q9H160 280 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 MCCC2Q9HCC0 563 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 AKAP13Q12802 2813 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 ENO4A6NNW6 628 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 BHLHE40O14503 412 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 CCL3P10147 92 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 MSX1P28360 303 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 CCR4P51679 360 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 CDH15P55291 814 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 RPS4XP62701 263 aaKnown RBP11.55□□□□□ -0.56
TRIM39-204ENST00000396548 INPP5JQ15735 1006 aaPredicted RBP11.55□□□□□ -0.56
TRIM39-204ENST00000396548 ACER2Q5QJU3 275 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 DEPDC4Q8N2C3 294 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 OR2M3Q8NG83 312 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 OSTF1Q92882 214 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 DUSP21Q9H596 190 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 GPN2Q9H9Y4 310 aaPredicted RBP11.55□□□□□ -0.56
TRIM39-204ENST00000396548 RASSF1Q9NS23 344 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 MED11Q9P086 117 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 PCDHGB6Q9Y5F9 930 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 H3BN98 237 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 DLL1O00548 723 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 TP53I11O14683 189 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 POU1F1P28069 291 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 FMO3P31513 532 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 TUBA4AP68366 448 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 LTBQ06643 244 aa11.55□□□□□ -0.56
TRIM39-204ENST00000396548 CRYZQ08257 329 aaKnown RBP11.55□□□□□ -0.56
TRIM39-204ENST00000396548 TOP3AQ13472 1001 aaPredicted RBP11.55□□□□□ -0.56
TRIM39-204ENST00000396548 OR5M10Q6IEU7 315 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms