RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 A4GALTQ9NPC4 353 aa12.75□□□□□ -0.37
NPC1-201ENST00000269228 KDM4EB2RXH2 506 aaPredicted RBP12.74□□□□□ -0.37
NPC1-201ENST00000269228 LMO7DNF2Z398 122 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 C5orf67F2Z3F1 127 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 FGF17O60258 216 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 POLR2HP52434 150 aaKnown RBP12.74□□□□□ -0.37
NPC1-201ENST00000269228 RAB2AP61019 212 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 TGFBR3Q03167 851 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 TSPAN31Q12999 210 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 HLA-BQ31612 363 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 CHRFAM7AQ494W8 412 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 RFT1Q96AA3 541 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 CDC6Q99741 560 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 C19orf43Q9BQ61 176 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 EDEM2Q9BV94 578 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 SLC6A5Q9Y345 797 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 SNX11Q9Y5W9 270 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 A0A1B0GWA3 101 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 KLK8O60259 260 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 TSPAN12O95859 305 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 SCGB1D2O95969 90 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 GM2AP17900 193 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 COL9A1P20849 921 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 APLNRP35414 380 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 GPR139Q6DWJ6 353 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 MARCH3Q86UD3 253 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 GRAMD2AQ8IUY3 354 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 ULBP2Q9BZM5 246 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 CDCP1Q9H5V8 836 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 ZNF442Q9H7R0 627 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 TMEM9BQ9NQ34 198 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 EMC3Q9P0I2 261 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 L7N2F9 121 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 IGHG1P01857 330 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 CD97P48960 835 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 VAMP2P63027 116 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 DNASE1L3Q13609 305 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 MISPQ8IVT2 679 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 SFTPA1Q8IWL2 248 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 OR8H1Q8NGG4 311 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 OR5W2Q8NH69 310 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 STT3BQ8TCJ2 826 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 C1QTNF3Q9BXJ4 246 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 FN3KQ9H479 309 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 TNFRSF12AQ9NP84 129 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 FOXD2O60548 495 aaPredicted RBP12.74□□□□□ -0.37
NPC1-201ENST00000269228 ZNF35P13682 527 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 TRHRP34981 398 aaPredicted RBP12.74□□□□□ -0.37
NPC1-201ENST00000269228 RAB11BQ15907 218 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 DUSP5Q16690 384 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 SLC6A19Q695T7 634 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 VASNQ6EMK4 673 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 PGBD2Q6P3X8 592 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 ZNF517Q6ZMY9 492 aaPredicted RBP12.74□□□□□ -0.37
NPC1-201ENST00000269228 RPS19BP1Q86WX3 136 aaKnown RBP12.74□□□□□ -0.37
NPC1-201ENST00000269228 TNFRSF13CQ96RJ3 184 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 C14orf119Q9NWQ9 140 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 POLHQ9Y253 713 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 ST14Q9Y5Y6 855 aa12.74□□□□□ -0.37
NPC1-201ENST00000269228 PLXNB2O15031 1838 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 TRAV6A0A075B6T7 132 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 C13orf42A0A1B0GVH6 325 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 NSA2O95478 260 aaKnown RBP12.73□□□□□ -0.37
NPC1-201ENST00000269228 DDAH2O95865 285 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 CHMP24386 653 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 THBS2P35442 1172 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 ZNF45Q02386 682 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 RSU1Q15404 277 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 HES5Q5TA89 166 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 KIAA1958Q8N8K9 716 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 OR6T1Q8NGN1 323 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 TMEM163Q8TC26 289 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 LMF1Q96S06 567 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 KATNB1Q9BVA0 655 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 THSD1Q9NS62 852 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 MED11Q9P086 117 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 TMED7-TICAM2A0A0A6YYA0 188 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 MRPL33O75394 65 aaKnown RBP12.73□□□□□ -0.37
NPC1-201ENST00000269228 RAB40BQ12829 278 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 KCTD9Q7L273 389 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 KIAA0907Q7Z7F0 614 aaPredicted RBP12.73□□□□□ -0.37
NPC1-201ENST00000269228 RNF113BQ8IZP6 322 aaKnown RBP12.73□□□□□ -0.37
NPC1-201ENST00000269228 TMED7Q9Y3B3 224 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.73□□□□□ -0.37
NPC1-201ENST00000269228 PRKAR1BP31321 381 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 AQP2P41181 271 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 MRPL21Q7Z2W9 205 aaKnown RBP12.73□□□□□ -0.37
NPC1-201ENST00000269228 TP53I13Q8NBR0 393 aaPredicted RBP12.73□□□□□ -0.37
NPC1-201ENST00000269228 MINDY2Q8NBR6 621 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 RSPRY1Q96DX4 576 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 TMEM38AQ9H6F2 299 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 PRELID1Q9Y255 219 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 DCDC2BA2VCK2 349 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 ITGAMP11215 1152 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 POLR2IP36954 125 aaKnown RBP12.73□□□□□ -0.37
NPC1-201ENST00000269228 BTG2P78543 158 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 FAM205BPQ63HN1 556 aa12.73□□□□□ -0.37
NPC1-201ENST00000269228 ZNF322Q6U7Q0 402 aaPredicted RBP12.73□□□□□ -0.37
NPC1-201ENST00000269228 MEPCEQ7L2J0 689 aaKnown RBP12.73□□□□□ -0.37
NPC1-201ENST00000269228 ATAD5Q96QE3 1844 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms