RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 FCARP24071 287 aa13.92□□□□□ -0.18
USP28-214ENST00000545540 UQCRC1P31930 480 aa13.92□□□□□ -0.18
USP28-214ENST00000545540 RPS27P42677 84 aaKnown RBP13.92□□□□□ -0.18
USP28-214ENST00000545540 EMDP50402 254 aa13.92□□□□□ -0.18
USP28-214ENST00000545540 RGS1Q08116 209 aa13.92□□□□□ -0.18
USP28-214ENST00000545540 CRYZQ08257 329 aaKnown RBP13.92□□□□□ -0.18
USP28-214ENST00000545540 FAM53BQ14153 422 aa13.92□□□□□ -0.18
USP28-214ENST00000545540 FAAP20Q6NZ36 180 aa13.92□□□□□ -0.18
USP28-214ENST00000545540 OAFQ86UD1 273 aa13.92□□□□□ -0.18
USP28-214ENST00000545540 ZNF784Q8NCA9 323 aaPredicted RBP13.92□□□□□ -0.18
USP28-214ENST00000545540 C1QTNF2Q9BXJ5 285 aa13.92□□□□□ -0.18
USP28-214ENST00000545540 RSPH9Q9H1X1 276 aaPredicted RBP13.92□□□□□ -0.18
USP28-214ENST00000545540 TCEAL2Q9H3H9 227 aaPredicted RBP13.92□□□□□ -0.18
USP28-214ENST00000545540 ING3Q9NXR8 418 aa13.92□□□□□ -0.18
USP28-214ENST00000545540 FLVCR2Q9UPI3 526 aa13.92□□□□□ -0.18
USP28-214ENST00000545540 HCN1O60741 890 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 COL9A1P20849 921 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 EEF1A1P68104 462 aaKnown RBP13.91□□□□□ -0.18
USP28-214ENST00000545540 GPM6BQ13491 265 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 FAM98AQ8NCA5 519 aaKnown RBP13.91□□□□□ -0.18
USP28-214ENST00000545540 FAM3CQ92520 227 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 RFT1Q96AA3 541 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 DERL3Q96Q80 235 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 AUNIPQ9H7T9 357 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 DAPP1Q9UN19 280 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 EXOGQ9Y2C4 368 aaKnown RBP13.91□□□□□ -0.18
USP28-214ENST00000545540 HEATR5AQ86XA9 2040 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 TRAPPC13A5PLN9 417 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 FZD7O75084 574 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 CELA2BP08218 269 aaPredicted RBP13.91□□□□□ -0.18
USP28-214ENST00000545540 ANKRD34CP0C6C1 535 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 ACSL1P33121 698 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 PGDP52209 483 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 CLDN20P56880 219 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 RPS21P63220 83 aaKnown RBP13.91□□□□□ -0.18
USP28-214ENST00000545540 TNFRSF17Q02223 184 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 RANBP3LQ86VV4 465 aaPredicted RBP13.91□□□□□ -0.18
USP28-214ENST00000545540 PAQR7Q86WK9 346 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 SLC44A3Q8N4M1 653 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 OR6K6Q8NGW6 343 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 OR4C6Q8NH72 309 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 ZPLD1Q8TCW7 415 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 ERMAPQ96PL5 475 aaPredicted RBP13.91□□□□□ -0.18
USP28-214ENST00000545540 OR14A2Q96R54 314 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 PCDHGB7Q9Y5F8 929 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 MPDZO75970 2070 aa13.91□□□□□ -0.18
USP28-214ENST00000545540 SCO1O75880 301 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 HMGN1P05114 100 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 NDUFS1P28331 727 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 VSX2P58304 361 aaPredicted RBP13.9□□□□□ -0.18
USP28-214ENST00000545540 ZNF85Q03923 595 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 C1orf61Q13536 156 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 GPR18Q14330 331 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 TRILQ7L0X0 811 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 TSSK2Q96PF2 358 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 TRIM36Q9NQ86 728 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 FLRT3Q9NZU0 649 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 DUXAA6NLW8 204 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 OR5F1O95221 314 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 THBS2P35442 1172 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 ADPRHP54922 357 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 SF3A2Q15428 464 aaKnown RBP13.9□□□□□ -0.18
USP28-214ENST00000545540 FAAH2Q6GMR7 532 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 ANKRD54Q6NXT1 300 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 PARGQ86W56 976 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 OR11H7Q8NGC8 314 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 OR11H4Q8NGC9 324 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 OR2A5Q96R48 311 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 GAS2L1Q99501 681 aaPredicted RBP13.9□□□□□ -0.18
USP28-214ENST00000545540 KCNJ15Q99712 375 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 MARVELD1Q9BSK0 173 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 NDC1Q9BTX1 674 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 NCKAP1Q9Y2A7 1128 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 SLC17A4Q9Y2C5 497 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 DTX4Q9Y2E6 619 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 H0YGG7 62 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 ARHGEF9O43307 516 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 B3GALT2O43825 422 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 STX11O75558 287 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 RPP14O95059 124 aaKnown RBP13.9□□□□□ -0.18
USP28-214ENST00000545540 APODP05090 189 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 ATF1P18846 271 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 BMP8BP34820 402 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 PBX2P40425 430 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 ARF3P61204 181 aaPredicted RBP13.9□□□□□ -0.18
USP28-214ENST00000545540 TMEM196Q5HYL7 178 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 CEP78Q5JTW2 689 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 HES5Q5TA89 166 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 BMP8AQ7Z5Y6 402 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 SIAH3Q8IW03 269 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 SRFBP1Q8NEF9 429 aaKnown RBP13.9□□□□□ -0.18
USP28-214ENST00000545540 OR52N1Q8NH53 320 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 ZFAND1Q8TCF1 268 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 EVA1BQ9NVM1 165 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 CALML5Q9NZT1 146 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 GNG8Q9UK08 70 aa13.9□□□□□ -0.18
USP28-214ENST00000545540 IRGMA1A4Y4 181 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 ACOD1A6NK06 481 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 ALX3O95076 343 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 SBK2P0C263 348 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms