RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 HOXD1Q9GZZ0 328 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 TMEM38AQ9H6F2 299 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 ABCD2Q9UBJ2 740 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 FOXD3Q9UJU5 478 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 ICAM5Q9UMF0 924 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 CARD8Q9Y2G2 431 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 ZNF337Q9Y3M9 751 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 WDR45Q9Y484 360 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 PHF3Q92576 2039 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 LRBAP50851 2863 aa7.88□□□□□ -1.15
PDLIM5-213ENST00000509357 CACNA1CQ13936 2221 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 A0A087WZY1 265 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 OR2M5A3KFT3 312 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 SERINC4A6NH21 518 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 AGAP5A6NIR3 686 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 FRS3O43559 492 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 HCRTR2O43614 444 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 TPST2O60704 377 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 DNAJA2O60884 412 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 SMNDC1O75940 238 aaKnown RBP eCLIP7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 UBOX5O94941 541 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 SOX30O94993 753 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 RCBTB2O95199 551 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 PGM3O95394 542 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 NTN1O95631 604 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 IL18BPO95998 194 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 OPN1SWP03999 348 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 IGFBP2P18065 325 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 ME2P23368 584 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 AQP1P29972 269 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 LCN1P31025 176 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 NUDT2P50583 147 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 SLC7A2P52569 658 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 DLX5P56178 289 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 CLDN18P56856 261 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 KRTAP10-9P60411 292 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 SLC25A3Q00325 362 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 FADDQ13158 208 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 KRT72Q14CN4 511 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 GLYR1Q49A26 553 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 GCNT6Q5T4J0 391 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 GKAP1Q5VSY0 366 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 EEF1A1P5Q5VTE0 462 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 OR2A2Q6IF42 318 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 HACD2Q6Y1H2 254 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 C16orf62Q7Z3J2 963 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 LUZP2Q86TE4 346 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 MISPQ8IVT2 679 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 CNEP1R1Q8N9A8 125 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 ACBD4Q8NC06 268 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 RELL2Q8NC24 303 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 FAM156AQ8NDB6 213 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 OR8J3Q8NGG0 315 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 B4GALNT2Q8NHY0 566 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 TAMM41Q96BW9 452 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 ZFP3Q96NJ6 502 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 LRRC37BQ96QE4 947 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 SFXN3Q9BWM7 321 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 PRR14Q9BWN1 585 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 RBM24Q9BX46 236 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 PINK1Q9BXM7 581 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 BCL2L10Q9HD36 194 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 DNAJB12Q9NXW2 375 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 P2RX2Q9UBL9 471 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 DTNAQ9Y4J8 743 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 GPC6Q9Y625 555 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 AP4B1Q9Y6B7 739 aa7.87□□□□□ -1.15
PDLIM5-213ENST00000509357 CSMD1Q96PZ7 3565 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 APCP25054 2843 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 INTS1Q8N201 2190 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 PRORSD1PA6NEY8 169 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 TUBAL3A6NHL2 446 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 DUXAA6NLW8 204 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 NDUFAB1O14561 156 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 EIF1AYO14602 144 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 CYP7B1O75881 506 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 MFN2O95140 757 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 TGM6O95932 706 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 AK1P00568 194 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 PLGP00747 810 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 OPN1LWP04000 364 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 LINGO3P0C6S8 592 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 GKN3PP0CG01 181 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 NR2F1P10589 423 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 CD247P20963 164 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 PCGF2P35227 344 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 MSX2P35548 267 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 ACAA2P42765 397 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 EIF1AXP47813 144 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 KCNJ5P48544 419 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 GSK3BP49841 420 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 SUCLG1P53597 346 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 CLDN20P56880 219 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 PSME3P61289 254 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 SIRPAP78324 504 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 HOXC5Q00444 222 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 CDK6Q00534 326 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 FOXF2Q12947 444 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 SCARB2Q14108 478 aa7.86□□□□□ -1.15
PDLIM5-213ENST00000509357 MAPRE2Q15555 327 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms