RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 LSRQ86X29 649 aaPredicted RBP24.93■■□□□ 1.58
SCARF1-207ENST00000573867 C10orf111Q8N326 155 aa24.93■■□□□ 1.58
SCARF1-207ENST00000573867 ARFGAP2Q8N6H7 521 aa24.93■■□□□ 1.58
SCARF1-207ENST00000573867 TOR1AIP2Q8NFQ8 470 aa24.93■■□□□ 1.58
SCARF1-207ENST00000573867 OR10D3Q8NH80 312 aa24.93■■□□□ 1.58
SCARF1-207ENST00000573867 ZFP3Q96NJ6 502 aa24.93■■□□□ 1.58
SCARF1-207ENST00000573867 TMEM120AQ9BXJ8 343 aa24.93■■□□□ 1.58
SCARF1-207ENST00000573867 MED4Q9NPJ6 270 aa24.93■■□□□ 1.58
SCARF1-207ENST00000573867 JKAMPQ9P055 326 aa24.93■■□□□ 1.58
SCARF1-207ENST00000573867 GPC6Q9Y625 555 aaPredicted RBP24.93■■□□□ 1.58
SCARF1-207ENST00000573867 NOTCH2Q04721 2471 aa24.93■■□□□ 1.58
SCARF1-207ENST00000573867 MED12LQ86YW9 2145 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 TRBV5-3A0A0A0MS03 114 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 TNFSF12-TNFSF13A0A0A6YY99 330 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 AGAP5A6NIR3 686 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 CLIC1O00299 241 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 TNFSF11O14788 317 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 TNFSF13O75888 250 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 AQP8O94778 261 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 TFPTP0C1Z6 253 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 OPRM1P35372 400 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 EIF1P41567 113 aaKnown RBP24.92■■□□□ 1.58
SCARF1-207ENST00000573867 EIF1AXP47813 144 aaKnown RBP24.92■■□□□ 1.58
SCARF1-207ENST00000573867 CBFBQ13951 182 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 FBXL19-AS1Q494R0 122 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 HSP90B2PQ58FF3 399 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 P4HA3Q7Z4N8 544 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 SLC38A5Q8WUX1 472 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 CNOT9Q92600 299 aaKnown RBP24.92■■□□□ 1.58
SCARF1-207ENST00000573867 SIKE1Q9BRV8 207 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 SFXN3Q9BWM7 321 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 VAPAQ9P0L0 249 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 P2RX2Q9UBL9 471 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 SLC35A3Q9Y2D2 325 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 ZNF175Q9Y473 711 aa24.92■■□□□ 1.58
SCARF1-207ENST00000573867 LRBAP50851 2863 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 HEATR5AQ86XA9 2040 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 INTS1Q8N201 2190 aaKnown RBP24.91■■□□□ 1.58
SCARF1-207ENST00000573867 DSPPQ9NZW4 1301 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 A0A1W2PNV4 684 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 SYT5O00445 386 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 ADAMDEC1O15204 470 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 BCHEP06276 602 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 ELK4P28324 431 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 ADH6P28332 368 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 SFTPDP35247 375 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 RPS3AP61247 264 aaKnown RBP24.91■■□□□ 1.58
SCARF1-207ENST00000573867 KCNJ10P78508 379 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 RGNQ15493 299 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 RPS26P11Q5JNZ5 115 aaPredicted RBP24.91■■□□□ 1.58
SCARF1-207ENST00000573867 LILRA2Q8N149 483 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 OR2V1Q8NHB1 315 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 MRGPRX4Q96LA9 322 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 KLHL15Q96M94 604 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 MTHFD2LQ9H903 347 aaPredicted RBP24.91■■□□□ 1.58
SCARF1-207ENST00000573867 RNF122Q9H9V4 155 aa24.91■■□□□ 1.58
SCARF1-207ENST00000573867 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.91■■□□□ 1.58
SCARF1-207ENST00000573867 ABCA12Q86UK0 2595 aa24.9■■□□□ 1.58
SCARF1-207ENST00000573867 A0A1W2PP18 115 aa24.9■■□□□ 1.58
SCARF1-207ENST00000573867 EEF1E1-BLOC1S5C9J1V9 151 aa24.9■■□□□ 1.58
SCARF1-207ENST00000573867 EEF1E1O43324 174 aaKnown RBP24.9■■□□□ 1.58
SCARF1-207ENST00000573867 CXCL13O43927 109 aa24.9■■□□□ 1.58
SCARF1-207ENST00000573867 TMEM19Q96HH6 336 aa24.9■■□□□ 1.58
SCARF1-207ENST00000573867 IKZF5Q9H5V7 419 aa24.9■■□□□ 1.58
SCARF1-207ENST00000573867 CCDC134Q9H6E4 229 aa24.9■■□□□ 1.58
SCARF1-207ENST00000573867 BMP2P12643 396 aa24.89■■□□□ 1.58
SCARF1-207ENST00000573867 SESN3P58005 492 aa24.89■■□□□ 1.58
SCARF1-207ENST00000573867 GUSBP1Q15486 140 aa24.89■■□□□ 1.58
SCARF1-207ENST00000573867 SGCBQ16585 318 aa24.89■■□□□ 1.58
SCARF1-207ENST00000573867 VWA1Q6PCB0 445 aa24.89■■□□□ 1.58
SCARF1-207ENST00000573867 DLEU7Q6UYE1 221 aa24.89■■□□□ 1.58
SCARF1-207ENST00000573867 ESPNLQ6ZVH7 1005 aa24.89■■□□□ 1.58
SCARF1-207ENST00000573867 RNASE6Q93091 150 aaKnown RBP24.89■■□□□ 1.58
SCARF1-207ENST00000573867 MAL2Q969L2 176 aa24.89■■□□□ 1.58
SCARF1-207ENST00000573867 DNAJB12Q9NXW2 375 aaKnown RBP24.89■■□□□ 1.58
SCARF1-207ENST00000573867 TRIM33Q9UPN9 1127 aa24.89■■□□□ 1.58
SCARF1-207ENST00000573867 AP3D1O14617 1153 aa24.88■■□□□ 1.57
SCARF1-207ENST00000573867 VIMP08670 466 aaKnown RBP24.88■■□□□ 1.57
SCARF1-207ENST00000573867 NID1P14543 1247 aa24.88■■□□□ 1.57
SCARF1-207ENST00000573867 ME2P23368 584 aa24.88■■□□□ 1.57
SCARF1-207ENST00000573867 UQCRC1P31930 480 aa24.88■■□□□ 1.57
SCARF1-207ENST00000573867 KIR2DL2P43627 348 aaPredicted RBP24.88■■□□□ 1.57
SCARF1-207ENST00000573867 HBMQ6B0K9 141 aa24.88■■□□□ 1.57
SCARF1-207ENST00000573867 GDF7Q7Z4P5 450 aa24.88■■□□□ 1.57
SCARF1-207ENST00000573867 RETREG3Q86VR2 466 aa24.88■■□□□ 1.57
SCARF1-207ENST00000573867 VRK2Q86Y07 508 aa24.88■■□□□ 1.57
SCARF1-207ENST00000573867 ATP6V1C2Q8NEY4 427 aa24.88■■□□□ 1.57
SCARF1-207ENST00000573867 WDR60Q8WVS4 1066 aa24.88■■□□□ 1.57
SCARF1-207ENST00000573867 RABEP2Q9H5N1 569 aa24.88■■□□□ 1.57
SCARF1-207ENST00000573867 COQ10BQ9H8M1 238 aa24.88■■□□□ 1.57
SCARF1-207ENST00000573867 EXOSC3Q9NQT5 275 aaKnown RBP24.88■■□□□ 1.57
SCARF1-207ENST00000573867 STOML1Q9UBI4 398 aa24.88■■□□□ 1.57
SCARF1-207ENST00000573867 ATP8B1O43520 1251 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 TROVE2P10155 538 aaKnown RBP eCLIP24.87■■□□□ 1.57
SCARF1-207ENST00000573867 PGCP20142 388 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 RYKP34925 604 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 MRPL2Q5T653 305 aaKnown RBP24.87■■□□□ 1.57
SCARF1-207ENST00000573867 METTL21CQ5VZV1 264 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 OR2A2Q6IF42 318 aa24.87■■□□□ 1.57
SCARF1-207ENST00000573867 LUZP2Q86TE4 346 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms