RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 A0A0J9YW62 118 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 A0A1W2PP18 115 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 AGAP5A6NIR3 686 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 DNAJA2O60884 412 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 NTN1O95631 604 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 IL18BPO95998 194 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 BCHEP06276 602 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 NUDT7P0C024 238 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 TFPTP0C1Z6 253 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 ADH6P28332 368 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 SFTPDP35247 375 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 OPRM1P35372 400 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 EIF1AXP47813 144 aaKnown RBP14.01□□□□□ -0.17
HMGA1-206ENST00000478214 DLX5P56178 289 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 KCNJ10P78508 379 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 PON3Q15166 354 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 RGNQ15493 299 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 SGCBQ16585 318 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 CTU2Q2VPK5 515 aaKnown RBP14.01□□□□□ -0.17
HMGA1-206ENST00000478214 LILRA2Q8N149 483 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 OR10D3Q8NH80 312 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 OR2V1Q8NHB1 315 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 SLC38A5Q8WUX1 472 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 CNOT9Q92600 299 aaKnown RBP14.01□□□□□ -0.17
HMGA1-206ENST00000478214 ZFP3Q96NJ6 502 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 CCDC134Q9H6E4 229 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 VAPAQ9P0L0 249 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 ZNF175Q9Y473 711 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 ABCA12Q86UK0 2595 aa14.01□□□□□ -0.17
HMGA1-206ENST00000478214 CACNA1DQ01668 2161 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 TRBV5-3A0A0A0MS03 114 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 A0A1W2PNV4 684 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 EEF1E1-BLOC1S5C9J1V9 151 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 ETV2O00321 342 aaPredicted RBP14□□□□□ -0.17
HMGA1-206ENST00000478214 TNFSF11O14788 317 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 ADAMDEC1O15204 470 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 EEF1E1O43324 174 aaKnown RBP14□□□□□ -0.17
HMGA1-206ENST00000478214 CXCL13O43927 109 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 RPS4Y1P22090 263 aaKnown RBP14□□□□□ -0.17
HMGA1-206ENST00000478214 ELK4P28324 431 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 RYKP34925 604 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 MDH1P40925 334 aaKnown RBP14□□□□□ -0.17
HMGA1-206ENST00000478214 ASCL1P50553 236 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 ARFIP2P53365 341 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 SESN3P58005 492 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 SLC25A53Q5H9E4 307 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 RPS26P11Q5JNZ5 115 aaPredicted RBP14□□□□□ -0.17
HMGA1-206ENST00000478214 METTL21CQ5VZV1 264 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 ESPNLQ6ZVH7 1005 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 ZNF295-AS1Q8N0V1 137 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 ATP6V1C2Q8NEY4 427 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 WDR60Q8WVS4 1066 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 TMEM19Q96HH6 336 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 MRGPRX4Q96LA9 322 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 KLHL15Q96M94 604 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 SFXN3Q9BWM7 321 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 TRIM8Q9BZR9 551 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 RAD21L1Q9H4I0 556 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 DOCK7Q96N67 2140 aa14□□□□□ -0.17
HMGA1-206ENST00000478214 DSPPQ9NZW4 1301 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 SYT5O00445 386 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 ADAM11O75078 769 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 AQP8O94778 261 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 DBIP07108 87 aaKnown RBP13.99□□□□□ -0.17
HMGA1-206ENST00000478214 BMP2P12643 396 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 IL7RP16871 459 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 PGCP20142 388 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 UQCRC1P31930 480 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 SLC6A8P48029 635 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 CRISP3P54108 245 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 FADDQ13158 208 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 SNTB1Q13884 538 aaKnown RBP13.99□□□□□ -0.17
HMGA1-206ENST00000478214 TMEM176BQ3YBM2 270 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-206ENST00000478214 HBMQ6B0K9 141 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 OR2A2Q6IF42 318 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 PPP4R4Q6NUP7 873 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 DLEU7Q6UYE1 221 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 RETREG3Q86VR2 466 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 DMRTC2Q8IXT2 367 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-206ENST00000478214 C10orf111Q8N326 155 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 ST8SIA1Q92185 356 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 PMM1Q92871 262 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 MAL2Q969L2 176 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 IKZF5Q9H5V7 419 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 RNF122Q9H9V4 155 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 EXOSC3Q9NQT5 275 aaKnown RBP13.99□□□□□ -0.17
HMGA1-206ENST00000478214 ACER3Q9NUN7 267 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 THUMPD1Q9NXG2 353 aaKnown RBP13.99□□□□□ -0.17
HMGA1-206ENST00000478214 DNAJB12Q9NXW2 375 aaKnown RBP13.99□□□□□ -0.17
HMGA1-206ENST00000478214 CALML5Q9NZT1 146 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-206ENST00000478214 LEF1Q9UJU2 399 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-206ENST00000478214 NDUFAF1Q9Y375 327 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 FBN2P35556 2912 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 DCHS2Q6V1P9 2916 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 TEX15Q9BXT5 2789 aa13.99□□□□□ -0.17
HMGA1-206ENST00000478214 TMEM247A6NEH6 219 aa13.98□□□□□ -0.17
HMGA1-206ENST00000478214 TNFSF13O75888 250 aa13.98□□□□□ -0.17
HMGA1-206ENST00000478214 CRHP06850 196 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms