RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 ScocQ78YZ6 125 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr1080Q7TR67 313 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Dsg1cQ7TSF0 911 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Serpinb9fQ80UK5 377 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tsen15Q8R3W5 168 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gatad2bQ8VHR5 594 aaKnown RBP15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Kcnj10Q9JM63 379 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Btbd16E9Q173 522 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cyp2d37-psF6YKB5 150 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Vmn2r117K7N6V1 857 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Pcdh12O55134 1180 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tcea3P23881 347 aaKnown RBP15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Nckap1P28660 1128 aaKnown RBP15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Rab33aP97950 237 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 RykQ01887 594 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr629Q0VBH3 314 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Diras2Q5PR73 199 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 OgnQ62000 298 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Ppp3r1Q63810 170 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 C1qtnf7Q8BVD7 289 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Pafah2Q8VDG7 390 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Taar1Q923Y8 332 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 DlstQ9D2G2 454 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Erp27Q9D8U3 272 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Phyhd1Q9DB26 291 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 HnrnpdlQ9Z130 301 aaKnown RBP15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gm3854A0A1B0GSS6 495 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Lrrc72A0A1Y7VMI0 288 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cytl1A1E5L0 139 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gm14399A2ARW8 610 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr730E9Q8M3 318 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gpr31F8VQN3 319 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Mtnd3P03899 115 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Mc3rP33033 323 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Mblac2Q8BL86 279 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cdkl1Q8CEQ0 352 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Irf2bplQ8K3X4 775 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr109Q8VG96 314 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 NansQ99J77 359 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Hipk2Q9QZR5 1196 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 H2afb1S4R1E0 115 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Prune2Q52KR3 3084 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gm9008E9PVG0 424 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Vmn1r14H3BJ46 303 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Slc6a12P31651 614 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 FahP35505 419 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Art5P70352 309 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr871Q7TRF0 311 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Slc26a11Q80ZD3 593 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Spag1Q80ZX8 901 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tm9sf4Q8BH24 643 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 GanabQ8BHN3 944 aaKnown RBP15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Fam92aQ8BP22 355 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Leng9Q8BTN6 485 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Rnf26Q8BUH7 424 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 H2afy2Q8CCK0 372 aaKnown RBP15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Nupl2Q8CIC2 420 aaKnown RBP15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr672Q8VG28 312 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Klhl22Q99JN2 634 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tspan31Q9CQ88 210 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 4931417E11RikQ9CR05 305 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Ccdc3Q9D6Y1 273 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Pop7Q9DCH2 140 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Lhx9Q9WUH2 397 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Slc7a7Q9Z1K8 510 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Baz2aQ91YE5 1889 aaKnown RBP15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Rev3lQ61493 3122 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Ppp1r3dA2AJW4 279 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Adap1E9PY16 374 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Fabp5Q05816 135 aaKnown RBP15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cnrip1Q5M8N0 164 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cd3eapQ76KJ5 399 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tas2r104Q7M723 302 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Acsm4Q80W40 580 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Rtn4rl1Q8K0S5 445 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Nxnl1Q8VC33 217 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tmigd1Q9D7L8 261 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Kcnd3Q9Z0V1 655 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 CorinQ9Z319 1113 aa15.15■□□□□ 0.02
Trim28-201ENSMUST00000005705 Trbc2A0A075B5J4 173 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Trbc1A0A0A6YWV4 173 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Gm4779A0A1B0GR91 561 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Slc1a3P56564 543 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 KapP61110 121 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Wfdc5Q4KXB6 126 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Slc44a5Q5RJI2 710 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Ranbp3lQ6PDH4 491 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Ston1Q8CDJ8 730 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Olfr353Q8VGK0 311 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Slc35b3Q922Q5 369 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Spef1Q99JL1 234 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 EcdQ9CS74 641 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Otud1Q9CUB6 454 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Plekhj1Q9D240 164 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Col4a6B1AVK5 1691 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Vmn1r90A0A087WR36 309 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Olfr1034A0A1L1ST14 310 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Gm29776A0A286YEC0 699 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Gm13078A2AGW8 474 aa15.14■□□□□ 0.01
Trim28-201ENSMUST00000005705 Fnd3c2A2AP83 941 aa15.14■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms