RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 IGLV3-32A0A0A0MS00 114 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 H3BNX3 289 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 FRS3O43559 492 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 TPST2O60704 377 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SNX4O95219 450 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 IFNW1P05000 195 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ITGB2P05107 769 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 FAM87AP0C7U9 286 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 UBTFL6P0CB48 400 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 GKN3PP0CG01 181 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ACAA2P42765 397 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ZNF136P52737 540 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ARG2P78540 354 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 VLDLRP98155 873 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SKP2Q13309 424 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 NPTX1Q15818 432 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 NDUFAF6Q330K2 333 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PRAMEF20Q5VT98 475 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SLC25A25Q6KCM7 469 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CBLN3Q6UW01 205 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ZDHHC21Q8IVQ6 265 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ZNF440Q8IYI8 595 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PSD4Q8NDX1 1056 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CATSPER1Q8NEC5 780 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 VANGL1Q8TAA9 524 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 STMN2Q93045 179 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ARHGAP9Q9BRR9 750 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 HHATLQ9HCP6 504 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 NDUFAF4Q9P032 175 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 WIF1Q9Y5W5 379 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ENPP4Q9Y6X5 453 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 EML6Q6ZMW3 1958 aa14.92□□□□□ -0.02
CDK5RAP3-228ENST00000583363 C17orf51A8MQB3 221 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 HNRNPRO43390 633 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 MGRN1O60291 552 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ADAM11O75078 769 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SLC25A12O75746 678 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CYP7B1O75881 506 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 KRT36O76013 467 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 FABP3P05413 133 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SP1P08047 785 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PRG2P13727 222 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 MSX1P28360 303 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 RGS8P57771 180 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 HOXC5Q00444 222 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ZNF117Q03924 483 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 EPS8Q12929 822 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 IGFL3Q6UXB1 125 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 WDSUB1Q8N9V3 476 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 B4GALNT2Q8NHY0 566 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PHF10Q8WUB8 498 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 TMEM41AQ96HV5 264 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ZNF300Q96RE9 604 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PRR14Q9BWN1 585 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 YY1AP1Q9H869 796 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ICAM5Q9UMF0 924 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PCDHGB7Q9Y5F8 929 aa14.91□□□□□ -0.02
CDK5RAP3-228ENST00000583363 B4DXG7 233 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 MKRN2OSH3BPM6 223 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 hCG_2039718K7EN88 272 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 HCRTR2O43614 444 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 FMO6PO60774 539 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SEMA7AO75326 666 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 TRIM3O75382 744 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 TIPRLO75663 272 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 MT-ND1P03886 318 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CD46P15529 392 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ITGA2P17301 1181 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 RHCEP18577 417 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 TNFSF10P50591 281 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 P2RX1P51575 399 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 INPP5JQ15735 1006 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 OR5M10Q6IEU7 315 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PACS2Q86VP3 889 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 TOR1AIP2Q8NFQ8 470 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 OR5W2Q8NH69 310 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ARSGQ96EG1 525 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SCMH1Q96GD3 660 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SH3YL1Q96HL8 342 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 MCHR1Q99705 422 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 DEPPQ9NTK1 212 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 MED11Q9P086 117 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PPP4R1LQ9P1A2 415 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PRDM4Q9UKN5 801 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 HEATR5AQ86XA9 2040 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PCNX3Q9H6A9 2034 aa14.9□□□□□ -0.02
CDK5RAP3-228ENST00000583363 G3V3Y1 287 aa14.89□□□□□ -0.03
CDK5RAP3-228ENST00000583363 J3KTA2 159 aa14.89□□□□□ -0.03
CDK5RAP3-228ENST00000583363 AP3D1O14617 1153 aa14.89□□□□□ -0.03
CDK5RAP3-228ENST00000583363 SNPHO15079 494 aa14.89□□□□□ -0.03
CDK5RAP3-228ENST00000583363 LINGO3P0C6S8 592 aa14.89□□□□□ -0.03
CDK5RAP3-228ENST00000583363 YAP1P46937 504 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-228ENST00000583363 SLC6A8P48029 635 aa14.89□□□□□ -0.03
CDK5RAP3-228ENST00000583363 DNASE1L1P49184 302 aa14.89□□□□□ -0.03
CDK5RAP3-228ENST00000583363 SRSF1Q07955 248 aaKnown RBP eCLIP14.89□□□□□ -0.035e-7■■□□□ 13.6
CDK5RAP3-228ENST00000583363 RIPK1Q13546 671 aa14.89□□□□□ -0.03
CDK5RAP3-228ENST00000583363 TIGD3Q6B0B8 471 aa14.89□□□□□ -0.03
CDK5RAP3-228ENST00000583363 DEF8Q6ZN54 512 aa14.89□□□□□ -0.03
CDK5RAP3-228ENST00000583363 RANBP3LQ86VV4 465 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms