RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 RPS3AP61247 264 aaKnown RBP15.65■□□□□ 0.1
MDC1-206ENST00000489540 RAC1P63000 192 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 KCNJ10P78508 379 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 FADDQ13158 208 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 CBFBQ13951 182 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 SLC25A35Q3KQZ1 300 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 CMIPQ8IY22 773 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 RNF145Q96MT1 663 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 ZFP3Q96NJ6 502 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 UCK2Q9BZX2 261 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 SLAMF8Q9P0V8 285 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 L3MBTL1Q9Y468 752 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 NCOA6Q14686 2063 aaPredicted RBP15.64■□□□□ 0.09
MDC1-206ENST00000489540 CENPVL1A0A0U1RR11 272 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 FAM90A27PA6NNH2 459 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 DNAJA2O60884 412 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 RCBTB2O95199 551 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 SNRPB2P08579 225 aaKnown RBP15.64■□□□□ 0.09
MDC1-206ENST00000489540 ME2P23368 584 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 PGM1P36871 562 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 SUCLG1P53597 346 aaKnown RBP15.64■□□□□ 0.09
MDC1-206ENST00000489540 CRISP3P54108 245 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 CLDN15P56746 228 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 CLDN20P56880 219 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 SKP2Q13309 424 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 NDUFAF6Q330K2 333 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 CGB2Q6NT52 195 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 TMCO5AQ8N6Q1 288 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 POC1BQ8TC44 478 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 SLC38A5Q8WUX1 472 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 MRGPRX4Q96LA9 322 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 ZNF317Q96PQ6 595 aaPredicted RBP15.64■□□□□ 0.09
MDC1-206ENST00000489540 KLHDC3Q9BQ90 382 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 RUBCNLQ9H714 662 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 SLC25A37Q9NYZ2 338 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 KLHL14Q9P2G3 628 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 CORO2BQ9UQ03 480 aa15.64■□□□□ 0.09
MDC1-206ENST00000489540 FREM3P0C091 2139 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 DVL2O14641 736 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 ANGPT2O15123 496 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 SEC14L5O43304 696 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 HNRNPRO43390 633 aaKnown RBP15.63■□□□□ 0.09
MDC1-206ENST00000489540 IL18BPO95998 194 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 DBIP07108 87 aaKnown RBP15.63■□□□□ 0.09
MDC1-206ENST00000489540 UBTFL6P0CB48 400 aaPredicted RBP15.63■□□□□ 0.09
MDC1-206ENST00000489540 BMP2P12643 396 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 CD1EP15812 388 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 IL7RP16871 459 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 PGCP20142 388 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 CTSSP25774 331 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 ELK4P28324 431 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 CCR4P51679 360 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 EEF1A1P68104 462 aaKnown RBP15.63■□□□□ 0.09
MDC1-206ENST00000489540 EEF1A1P5Q5VTE0 462 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 GRAMD2AQ8IUY3 354 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 LIX1LQ8IVB5 337 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 MSRB3Q8IXL7 192 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 PEX5LQ8IYB4 626 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 DPP10Q8N608 796 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 METTL25Q8N6Q8 603 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 C9orf106Q8NAJ2 232 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 NAXEQ8NCW5 288 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 FAM71CQ8NEG0 241 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 FBXO27Q8NI29 283 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 TMEM234Q8WY98 164 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 SMPDL3BQ92485 455 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 THUMPD3Q9BV44 507 aaKnown RBP15.63■□□□□ 0.09
MDC1-206ENST00000489540 QRSL1Q9H0R6 528 aaKnown RBP15.63■□□□□ 0.09
MDC1-206ENST00000489540 EXOSC3Q9NQT5 275 aaKnown RBP15.63■□□□□ 0.09
MDC1-206ENST00000489540 PAQR5Q9NXK6 330 aaPredicted RBP15.63■□□□□ 0.09
MDC1-206ENST00000489540 VAPAQ9P0L0 249 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 CLCF1Q9UBD9 225 aa15.63■□□□□ 0.09
MDC1-206ENST00000489540 TRBV5-3A0A0A0MS03 114 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 A0A0G2JPF8 293 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 NKX2-6A6NCS4 301 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 EVPLLA8MZ36 301 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 HNRNPCL2B2RXH8 293 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 HNRNPCL3B7ZW38 293 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 H0YC42 278 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 ETV2O00321 342 aaPredicted RBP15.62■□□□□ 0.09
MDC1-206ENST00000489540 HNRNPCL1O60812 293 aaKnown RBP15.62■□□□□ 0.09
MDC1-206ENST00000489540 BCHEP06276 602 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 HNRNPCL4P0DMR1 293 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 TMIGD3P0DMS9 266 aaPredicted RBP15.62■□□□□ 0.09
MDC1-206ENST00000489540 PRKCAP17252 672 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 RPS4Y1P22090 263 aaKnown RBP15.62■□□□□ 0.09
MDC1-206ENST00000489540 OPRM1P35372 400 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 SLC6A8P48029 635 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 TPD52P55327 224 aaPredicted RBP15.62■□□□□ 0.09
MDC1-206ENST00000489540 FOXF1Q12946 379 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 QPRTQ15274 297 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 MAPK11Q15759 364 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 TOMM34Q15785 309 aaPredicted RBP15.62■□□□□ 0.09
MDC1-206ENST00000489540 SGCBQ16585 318 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 ZSWIM7Q19AV6 140 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 SLC25A53Q5H9E4 307 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 PDSS1Q5T2R2 415 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 PRAMEF8Q5VWM4 474 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 PRAMEF7Q5VXH5 474 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms