RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 SF3B4Q15427 424 aaKnown RBP eCLIP16.1■□□□□ 0.17
SMIM4-202ENST00000476842 PLPPR5Q32ZL2 321 aa16.1■□□□□ 0.17
SMIM4-202ENST00000476842 RTL6Q6ICC9 239 aa16.1■□□□□ 0.17
SMIM4-202ENST00000476842 HMGN2P46Q86SG4 172 aa16.1■□□□□ 0.17
SMIM4-202ENST00000476842 TREML1Q86YW5 311 aa16.1■□□□□ 0.17
SMIM4-202ENST00000476842 POU5F2Q8N7G0 328 aa16.1■□□□□ 0.17
SMIM4-202ENST00000476842 OR5M1Q8NGP8 315 aa16.1■□□□□ 0.17
SMIM4-202ENST00000476842 OR52P1PQ8NH57 321 aa16.1■□□□□ 0.17
SMIM4-202ENST00000476842 BBS10Q8TAM1 723 aa16.1■□□□□ 0.17
SMIM4-202ENST00000476842 WDR60Q8WVS4 1066 aa16.1■□□□□ 0.17
SMIM4-202ENST00000476842 EXOSC3Q9NQT5 275 aaKnown RBP16.1■□□□□ 0.17
SMIM4-202ENST00000476842 ZNF232Q9UNY5 417 aa16.1■□□□□ 0.17
SMIM4-202ENST00000476842 CAMK2AQ9UQM7 478 aa16.1■□□□□ 0.17
SMIM4-202ENST00000476842 ZNF407Q9C0G0 2248 aa16.1■□□□□ 0.17
SMIM4-202ENST00000476842 NCKAP5O14513 1909 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 CLDN24A6NM45 220 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 FXYD1O00168 92 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 SHOX2O60902 331 aaPredicted RBP16.09■□□□□ 0.17
SMIM4-202ENST00000476842 CYP7B1O75881 506 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 NUDT14O95848 222 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 UBTFL6P0CB48 400 aaPredicted RBP16.09■□□□□ 0.17
SMIM4-202ENST00000476842 NID1P14543 1247 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 ETS2P15036 469 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 ZNF708P17019 499 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 PSMA4P25789 261 aaKnown RBP16.09■□□□□ 0.17
SMIM4-202ENST00000476842 ADH6P28332 368 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 EIF1P41567 113 aaKnown RBP16.09■□□□□ 0.17
SMIM4-202ENST00000476842 RBBP4Q09028 425 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 CBFBQ13951 182 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 TOMM34Q15785 309 aaPredicted RBP16.09■□□□□ 0.17
SMIM4-202ENST00000476842 ZSWIM7Q19AV6 140 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 RPS26P11Q5JNZ5 115 aaPredicted RBP16.09■□□□□ 0.17
SMIM4-202ENST00000476842 C1orf185Q5T7R7 199 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 REEP3Q6NUK4 255 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 B3GNT6Q6ZMB0 384 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 ANKS4BQ8N8V4 417 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 OR8J3Q8NGG0 315 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 NFKBIDQ8NI38 313 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 POC1BQ8TC44 478 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 ZPLD1Q8TCW7 415 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 CNOT9Q92600 299 aaKnown RBP16.09■□□□□ 0.17
SMIM4-202ENST00000476842 TRIM8Q9BZR9 551 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 IFT52Q9Y366 437 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 FAM215AQ9Y5M1 114 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 GPC6Q9Y625 555 aaPredicted RBP16.09■□□□□ 0.17
SMIM4-202ENST00000476842 AP4B1Q9Y6B7 739 aa16.09■□□□□ 0.17
SMIM4-202ENST00000476842 SHISA8B8ZZ34 492 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 ETV2O00321 342 aaPredicted RBP16.08■□□□□ 0.16
SMIM4-202ENST00000476842 ZG16O60844 167 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 BCAS1O75363 584 aaPredicted RBP16.08■□□□□ 0.16
SMIM4-202ENST00000476842 EPPINO95925 133 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 FAM107AO95990 144 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 THBS1P07996 1170 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 PGCP20142 388 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 SLC6A2P23975 617 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 PRDX6P30041 224 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 CLDN18P56856 261 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 ADORA2A-AS1P86434 159 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 PLAURQ03405 335 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 PMPCAQ10713 525 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 SCARB2Q14108 478 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 LARS2Q15031 903 aaKnown RBP16.08■□□□□ 0.16
SMIM4-202ENST00000476842 LIN52Q52LA3 116 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 SLC25A53Q5H9E4 307 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 RPTNQ6XPR3 784 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 NET1Q7Z628 596 aaPredicted RBP16.08■□□□□ 0.16
SMIM4-202ENST00000476842 SERPINA11Q86U17 422 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 VRK2Q86Y07 508 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 PTOV1Q86YD1 416 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 RPRMLQ8N4K4 120 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 MARVELD2Q8N4S9 558 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 TMCO5AQ8N6Q1 288 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 ZNF524Q96C55 264 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 RCN3Q96D15 328 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 CMTM5Q96DZ9 223 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 NPAS1Q99742 590 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 SLC39A3Q9BRY0 314 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 TTYH2Q9BSA4 534 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 EFCAB1Q9HAE3 211 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 STOML1Q9UBI4 398 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 PRDM4Q9UKN5 801 aa16.08■□□□□ 0.16
SMIM4-202ENST00000476842 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 RNF224P0DH78 156 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 GLI4P10075 376 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 PRKCAP17252 672 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 POU3F2P20265 443 aaPredicted RBP16.07■□□□□ 0.16
SMIM4-202ENST00000476842 AGAP20933 346 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 SLC6A8P48029 635 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 GZMMP51124 257 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 CCR4P51679 360 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 SMSP52788 366 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 EEF1A1P68104 462 aaKnown RBP16.07■□□□□ 0.16
SMIM4-202ENST00000476842 SRYQ05066 204 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 CYP51A1Q16850 503 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 ACSF3Q4G176 576 aaPredicted RBP16.07■□□□□ 0.16
SMIM4-202ENST00000476842 RABL3Q5HYI8 236 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 MRPL2Q5T653 305 aaKnown RBP16.07■□□□□ 0.16
SMIM4-202ENST00000476842 RNF220Q5VTB9 566 aa16.07■□□□□ 0.16
SMIM4-202ENST00000476842 NCCRP1Q6ZVX7 275 aaPredicted RBP16.07■□□□□ 0.16
SMIM4-202ENST00000476842 GRAMD2AQ8IUY3 354 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms