RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ZNF527Q8NB42 609 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 OR9Q2Q8NGE9 314 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 OR14A16Q8NHC5 309 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 LILRB4Q8NHJ6 448 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 SLC7A13Q8TCU3 470 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 SLC46A1Q96NT5 459 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 PHOX2BQ99453 314 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 BCL7BQ9BQE9 202 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 SPATA5L1Q9BVQ7 753 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 ULBP3Q9BZM4 244 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 OR8D2Q9GZM6 311 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 REEP1Q9H902 201 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 FAM118AQ9NWS6 357 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 IFT52Q9Y366 437 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 PCDHGA10Q9Y5H3 936 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 PCDHGA1Q9Y5H4 931 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 NOX1Q9Y5S8 564 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 CPAMD8Q8IZJ3 1885 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 LOC102723996A0A087X1L8 192 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 FRG2CA6NGY1 282 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 TO15178 435 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 RRP8O43159 456 aaKnown RBP7.61□□□□□ -1.19
BRCA1-208ENST00000468300 GOSR1O95249 250 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 OXSR1O95747 527 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-208ENST00000468300 TP53P04637 393 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-208ENST00000468300 THRBP10828 461 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 TNNI3P19429 210 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 CBLP22681 906 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 HTR2BP41595 481 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 CLK3P49761 638 aaKnown RBP7.61□□□□□ -1.19
BRCA1-208ENST00000468300 KLHL26Q53HC5 615 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 MRPL2Q5T653 305 aaKnown RBP7.61□□□□□ -1.19
BRCA1-208ENST00000468300 APOOLQ6UXV4 268 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 DEF8Q6ZN54 512 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 CNBD2Q96M20 576 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 FEVQ99581 238 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 CDC6Q99741 560 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 GPA33Q99795 319 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 KLHDC3Q9BQ90 382 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 GRIP2Q9C0E4 1043 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 NRSN2Q9GZP1 204 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 WWTR1Q9GZV5 400 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 OCEL1Q9H607 264 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 CLCA3PQ9Y6N3 262 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 ARRDC5A6NEK1 342 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 SAGE2PA6NJ88 616 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 EIF4E1BA6NMX2 242 aaKnown RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 TERTO14746 1132 aaKnown RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 CSO75390 466 aaKnown RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 GASTP01350 101 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 CAPGP40121 348 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 ACAA2P42765 397 aaKnown RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 KCNAB2Q13303 367 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 DGCR6Q14129 220 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 TRIP6Q15654 476 aaKnown RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 COLEC12Q5KU26 742 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 PDZK1Q5T2W1 519 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 STPG1Q5TH74 334 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 DHRS13Q6UX07 377 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 BEND4Q6ZU67 534 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 NLRC3Q7RTR2 1065 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 FBLIM1Q8WUP2 373 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 C8orf44Q96CB5 159 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 CMKLR1Q99788 373 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 CRB3Q9BUF7 120 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 VCXQ9H320 206 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 DNAJB12Q9NXW2 375 aaKnown RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 FOXJ2Q9P0K8 574 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 B4DXG7 233 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 H0YAE9 185 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 TM4SF5O14894 197 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 SLC16A6O15403 523 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 TSPAN2O60636 221 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 SOX30O94993 753 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 GADD45GO95257 159 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 MT-CO3P00414 261 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 DBIP07108 87 aaKnown RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 LYNP07948 512 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 RPS2P15880 293 aaKnown RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 SLC5A2P31639 672 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 E2F1Q01094 437 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 OCA2Q04671 838 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 MED21Q13503 144 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 FGFBP1Q14512 234 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 FLYWCH1Q4VC44 716 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 WDR88Q6ZMY6 472 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 RAB11FIP2Q7L804 512 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 SCAIQ8N9R8 606 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 PRRC1Q96M27 445 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 RDH12Q96NR8 316 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 PRSS27Q9BQR3 290 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 GABARAPL3Q9BY60 117 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 GLRX2Q9NS18 164 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 REV1Q9UBZ9 1251 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 PRODH2Q9UF12 536 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 C3orf18Q9UK00 162 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 SPENQ96T58 3664 aaKnown RBP7.6□□□□□ -1.19
BRCA1-208ENST00000468300 CFAP47Q6ZTR5 3102 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 SH3PXD2BA1X283 911 aa7.6□□□□□ -1.19
BRCA1-208ENST00000468300 CDC14CA4D256 554 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms