RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 CHIAQ9BZP6 476 aa8.74□□□□□ -1.01
AP003900.1-202ENST00000616952 EHD1Q9H4M9 534 aa8.74□□□□□ -1.01
AP003900.1-202ENST00000616952 DENND2DQ9H6A0 471 aaPredicted RBP8.74□□□□□ -1.01
AP003900.1-202ENST00000616952 CXorf36Q9H7Y0 433 aa8.74□□□□□ -1.01
AP003900.1-202ENST00000616952 NT5DC2Q9H857 520 aa8.74□□□□□ -1.01
AP003900.1-202ENST00000616952 VDAC3Q9Y277 283 aa8.74□□□□□ -1.01
AP003900.1-202ENST00000616952 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.74□□□□□ -1.01
AP003900.1-202ENST00000616952 TET2Q6N021 2002 aaPredicted RBP8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 WI2-2373I1.2A0A1W2PRP0 233 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 SH3PXD2BA1X283 911 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 SRRM5B3KS81 715 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 H0YL77 283 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 ALOX5P09917 674 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 NHLRC4P0CG21 123 aaPredicted RBP8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 NR2F6P10588 404 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 COMTP21964 271 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 ME2P23368 584 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 COL8A2P25067 703 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 KRT20P35900 424 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 FEN1P39748 380 aaKnown RBP8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 PPICP45877 212 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 MARCKSL1P49006 195 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 RGS4P49798 205 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 GABRA6Q16445 453 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 NRN1LQ496H8 165 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 OR7E24Q6IFN5 339 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 C9orf139Q6ZV77 190 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 LARP4Q71RC2 724 aaKnown RBP eCLIP8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 JAZF1Q86VZ6 243 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 ZNF100Q8IYN0 542 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 CDK20Q8IZL9 346 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 WDR31Q8NA23 367 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 SLC16A11Q8NCK7 471 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 SLC35G2Q8TBE7 412 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 RDH5Q92781 318 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 SLC47A1Q96FL8 570 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 KLHL15Q96M94 604 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 MUS81Q96NY9 551 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 KCNS3Q9BQ31 491 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 PSD2Q9BQI7 771 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 MS4A8Q9BY19 250 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 PITHD1Q9GZP4 211 aaPredicted RBP8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 MARCH7Q9H992 704 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 PALMDQ9NP74 551 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 SLC6A13Q9NSD5 602 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 FAM120CQ9NX05 1096 aaKnown RBP8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 KLHL9Q9P2J3 617 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 BCAP29Q9UHQ4 241 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 TRMT6Q9UJA5 497 aaKnown RBP8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 AMDHD2Q9Y303 409 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 PLLPQ9Y342 182 aa8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 SOX21Q9Y651 276 aaPredicted RBP8.73□□□□□ -1.01
AP003900.1-202ENST00000616952 WNK2Q9Y3S1 2297 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 LRRC10BA6NIK2 292 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 SAP18O00422 153 aaKnown RBP8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 PHGDHO43175 533 aaKnown RBP8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 GMFGO60234 142 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 IGHV3-9P01782 118 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 IGHV2-5P01817 119 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 HPXP02790 462 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 MYZAPP0CAP1 466 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 LYL1P12980 280 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 NT5EP21589 574 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 FUT4P22083 530 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 RPL15P61313 204 aaKnown RBP8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 EXOSC7Q15024 291 aaKnown RBP8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 TMEM35AQ53FP2 167 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 FBXW9Q5XUX1 488 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 GALNT18Q6P9A2 607 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 SPATA21Q7Z572 469 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 UBE2J2Q8N2K1 259 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 GTPBP8Q8N3Z3 284 aaPredicted RBP8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 CKAP2Q8WWK9 683 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 JADE3Q92613 823 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 YIPF5Q969M3 257 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 MFSD3Q96ES6 412 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 LINGO1Q96FE5 620 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 NPAS1Q99742 590 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 ANP32EQ9BTT0 268 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 ZNF416Q9BWM5 594 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 TRIM54Q9BYV2 358 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 RTN4RQ9BZR6 473 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 TIGARQ9NQ88 270 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 SDHAF3Q9NRP4 125 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 OXSMQ9NWU1 459 aa8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 RPUSD1Q9UJJ7 312 aaKnown RBP8.72□□□□□ -1.01
AP003900.1-202ENST00000616952 FAM95CA0A1B0GW59 222 aa8.71□□□□□ -1.02
AP003900.1-202ENST00000616952 PIP5K1BO14986 540 aa8.71□□□□□ -1.02
AP003900.1-202ENST00000616952 SH3BGRLO75368 114 aa8.71□□□□□ -1.02
AP003900.1-202ENST00000616952 RP2O75695 350 aa8.71□□□□□ -1.02
AP003900.1-202ENST00000616952 SERPING1P05155 500 aa8.71□□□□□ -1.02
AP003900.1-202ENST00000616952 SFTPBP07988 381 aa8.71□□□□□ -1.02
AP003900.1-202ENST00000616952 TMEM253P0C7T8 217 aa8.71□□□□□ -1.02
AP003900.1-202ENST00000616952 NPR2P20594 1047 aa8.71□□□□□ -1.02
AP003900.1-202ENST00000616952 ENPP1P22413 925 aa8.71□□□□□ -1.02
AP003900.1-202ENST00000616952 PSMA4P25789 261 aaKnown RBP8.71□□□□□ -1.02
AP003900.1-202ENST00000616952 MAGEA1P43355 309 aa8.71□□□□□ -1.02
AP003900.1-202ENST00000616952 SESN2P58004 480 aaPredicted RBP8.71□□□□□ -1.02
AP003900.1-202ENST00000616952 LCN2P80188 198 aa8.71□□□□□ -1.02
AP003900.1-202ENST00000616952 EXOSC6Q5RKV6 272 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms