RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ADAM19Q9H013 955 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 CDT1Q9H211 546 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 ASIC5Q9NY37 505 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 PCTPQ9UKL6 214 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 MRPS18CQ9Y3D5 142 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 PLXNA1Q9UIW2 1896 aa8.3□□□□□ -1.08
CDC42BPA-206ENST00000429440 A0A0A6YYC8 382 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 A6NJY4 79 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 IFITM10A6NMD0 228 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 I3L1I5 382 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 TLR4O00206 839 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 TNFRSF10BO14763 440 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 LRRTM2O43300 516 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 EMC8O43402 210 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 KLK8O60259 260 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 SLC25A12O75746 678 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 NCR1O76036 304 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 KCNK5O95279 499 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 ACTL6AO96019 429 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 PLGP00747 810 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 IFNA17P01571 189 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 ITGA5P08648 1049 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 CXCL8P10145 99 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 NME1P15531 152 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 AGTR1P30556 359 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 SCNN1AP37088 669 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 GDNFP39905 211 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 AKR1C2P52895 323 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 AKR1C1Q04828 323 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 AMHR2Q16671 573 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 NKPD1Q17RQ9 610 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 TIGD5Q53EQ6 642 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 MPPE1Q53F39 396 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF667Q5HYK9 610 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 OTUD1Q5VV17 481 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 NSUN5P2Q63ZY6 315 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 IL34Q6ZMJ4 242 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 PEG10Q86TG7 708 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 PARGQ86W56 976 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 VRK3Q8IV63 474 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 PYROXD2Q8N2H3 581 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR8J1Q8NGP2 316 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR1J4Q8NGS1 313 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR5R1Q8NH85 324 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 THEM6Q8WUY1 208 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 SLC6A18Q96N87 628 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 CLCC1Q96S66 551 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 MGME1Q9BQP7 344 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 FDXACB1Q9BRP7 624 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 SYT17Q9BSW7 474 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 TMEM208Q9BTX3 173 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 TSSK6Q9BXA6 273 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 NT5C1AQ9BXI3 368 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 SEC61A2Q9H9S3 476 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 SARS2Q9NP81 518 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 ASB6Q9NWX5 421 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 NKIRAS2Q9NYR9 191 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 RCC2Q9P258 522 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 TESQ9UGI8 421 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 TNFSF13BQ9Y275 285 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 DNAH12Q6ZR08 3092 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 ALPK3Q96L96 1907 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 SHISA3A0PJX4 238 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 IRGMA1A4Y4 181 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 A6NCN8 305 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 LRRN3E7EW58 273 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 M0QZK8 103 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 CTDSPLO15194 276 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 MT-ND4P03905 459 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 WNT1P04628 370 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 THBS1P07996 1170 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 SPARCP09486 303 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 CD3GP09693 182 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 HMGA2P52926 109 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 WNT3P56703 355 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 SOX8P57073 446 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 HGFACQ04756 655 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF345Q14585 488 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 RBBP7Q16576 425 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF630Q2M218 657 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 C6orf120Q7Z4R8 191 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 RANBP3LQ86VV4 465 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 PTOV1Q86YD1 416 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 MARCH9Q86YJ5 346 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 RYBPQ8N488 228 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 LINC01465Q8N7H1 131 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 C1orf127Q8N9H9 656 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR52I1Q8NGK6 324 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 JAM3Q9BX67 310 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 LRRN3Q9H3W5 708 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 FAM124BQ9H5Z6 455 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 EPHX3Q9H6B9 360 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 WDCPQ9H6R7 721 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 TMPRSS4Q9NRS4 437 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF69Q9UC07 566 aa8.29□□□□□ -1.08
CDC42BPA-206ENST00000429440 DSPPQ9NZW4 1301 aa8.28□□□□□ -1.08
CDC42BPA-206ENST00000429440 C2orf92A0A1B0GVN3 265 aa8.28□□□□□ -1.08
CDC42BPA-206ENST00000429440 SUPT3HB4E1H0 165 aa8.28□□□□□ -1.08
CDC42BPA-206ENST00000429440 SEC14L6B5MCN3 397 aa8.28□□□□□ -1.08
CDC42BPA-206ENST00000429440 F5H5P2 479 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms