RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 PtgfrnQ9WV91 879 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Dbil5O09035 87 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Zfp37P17141 594 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Syt4P40749 425 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 EpxP49290 716 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 CtskP55097 329 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Csn1s2aQ02862 184 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Slc30a1Q60738 503 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Pum2Q80U58 1066 aaKnown RBP14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Gm10330Q8BKS1 112 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Sucnr1Q99MT6 317 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Isoc2bQ9DCC7 210 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Pla2g12aQ9EPR2 192 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 PaplnQ9EPX2 1280 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Ntn4Q9JI33 628 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Tmem196V9GX04 182 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Tcrg-V7A0A0A6YYE8 116 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Klhl3E0CZ16 587 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Olfr543E9PWI5 336 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Gm17728E9Q5K2 132 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Ido1P28776 407 aaKnown RBP14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Nrsn2Q5HZK2 202 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 MkxQ8BIA3 353 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Ccdc126Q8BIS8 140 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Hcar1Q8C131 343 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Hist1h2aaQ8CGP4 129 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Blzf1Q8R2X8 403 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Olfr109Q8VG96 314 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Mrpl54Q9CPW3 135 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 CenpvQ9CXS4 252 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Q9D4G1 230 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Notch4P31695 1964 aa14.78□□□□□ -0.04
Trim39-203ENSMUST00000113706 Olfr1555-ps1A0A140LHT7 321 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Olfr287E9PZS7 322 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Syt3O35681 587 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Hoxc5P32043 222 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 CtrcQ3SYP2 268 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 AhrrQ3U1U7 701 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Cyb5d2Q5SSH8 263 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Ttc29Q80VM3 471 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Hs3st3a1Q8BKN6 393 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Pias2Q8C5D8 621 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Abcg5Q99PE8 652 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Tmem179bQ9CY24 219 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Acad8Q9D7B6 413 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Phyhd1Q9DB26 291 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 B3galt5Q9JI67 308 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Akap8lQ9R0L7 642 aaKnown RBP14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 SptbP15508 2128 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Olfr396-ps1A0A0U1RNF5 211 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Gm35315A0A1B0GRI2 571 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Gm44G3UW88 330 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Slc22a1O08966 556 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Wnt11P48615 354 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 SnrpgP62309 76 aaKnown RBP14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Gm1604bQ3TRG0 118 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Coq8bQ566J8 533 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 CfiQ61129 603 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Ip6k3Q8BWD2 396 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Ttc4Q8R3H9 386 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Olfr582Q8VGV9 319 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Sh3bp4Q921I6 962 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Zcchc12Q9CZA5 402 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Chp2Q9D869 196 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Tpk1Q9R0M5 243 aa14.77□□□□□ -0.04
Trim39-203ENSMUST00000113706 Tnfrsf25B1AWN9 411 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Gm5724L7N264 670 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Apoa2P09813 102 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Cox5bP19536 128 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Taf1aP97357 453 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Ankub1Q3UUE9 192 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Klra2Q60660 288 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Ubash3bQ8BGG7 638 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 TiprlQ8BH58 271 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 AntxrlQ8BVM2 641 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Olfr1312Q8VF10 317 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Olfr160Q8VGE3 309 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Slc7a13Q91WN3 478 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Q9CR55 154 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Cthrc1Q9D1D6 245 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Phf6Q9D4J7 364 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Cd302Q9DCG2 228 aa14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Rtp4Q9ER80 249 aaKnown RBP14.77□□□□□ -0.05
Trim39-203ENSMUST00000113706 Igkv12-38A0A0G2JEI7 115 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 Igkv6-32A0A140T8N9 115 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 NgpO08692 167 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 Lancl1O89112 399 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 Kcne1P23299 129 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 GlaP51569 419 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 Dcst1Q059Y8 732 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 2410002F23RikQ3TE80 284 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 Timd4Q6U7R4 343 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 Adgrd1Q80T32 903 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 Zc3hc1Q80YV2 501 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 Asb6Q91ZU1 418 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 Mfsd1Q9DC37 464 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 Serpini2Q9JK88 405 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 Nectin3Q9JLB9 549 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 Acot2Q9QYR9 453 aa14.76□□□□□ -0.05
Trim39-203ENSMUST00000113706 Gm17190V9GX38 357 aa14.76□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 52 ms