Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Zc3hc1Q80YV2 Gm25239-201ENSMUST00000174915 86 ntBASIC31.45■■■□□ 2.63
Zc3hc1Q80YV2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Zc3hc1Q80YV2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Zc3hc1Q80YV2 Psd-208ENSMUST00000224556 2034 ntBASIC29.65■■■□□ 2.34
Zc3hc1Q80YV2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Zc3hc1Q80YV2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Zc3hc1Q80YV2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Zc3hc1Q80YV2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Zc3hc1Q80YV2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Zc3hc1Q80YV2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Zc3hc1Q80YV2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Zc3hc1Q80YV2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Zc3hc1Q80YV2 Gm15042-201ENSMUST00000120212 883 ntBASIC28.36■■■□□ 2.13
Zc3hc1Q80YV2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Zc3hc1Q80YV2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Zc3hc1Q80YV2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.2■■■□□ 2.1
Zc3hc1Q80YV2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Zc3hc1Q80YV2 Gm15045-201ENSMUST00000117359 883 ntBASIC27.88■■■□□ 2.05
Zc3hc1Q80YV2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Zc3hc1Q80YV2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Zc3hc1Q80YV2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Zc3hc1Q80YV2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Zc3hc1Q80YV2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Zc3hc1Q80YV2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Zc3hc1Q80YV2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Zc3hc1Q80YV2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.33■■□□□ 1.97
Zc3hc1Q80YV2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Zc3hc1Q80YV2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Zc3hc1Q80YV2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
Zc3hc1Q80YV2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Zc3hc1Q80YV2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Zc3hc1Q80YV2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.21■■□□□ 1.95
Zc3hc1Q80YV2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Zc3hc1Q80YV2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.09■■□□□ 1.93
Zc3hc1Q80YV2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Zc3hc1Q80YV2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Zc3hc1Q80YV2 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.87■■□□□ 1.89
Zc3hc1Q80YV2 Gm24109-201ENSMUST00000175489 103 ntBASIC26.87■■□□□ 1.89
Zc3hc1Q80YV2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Zc3hc1Q80YV2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Zc3hc1Q80YV2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.75■■□□□ 1.87
Zc3hc1Q80YV2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Zc3hc1Q80YV2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.58■■□□□ 1.84
Zc3hc1Q80YV2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Zc3hc1Q80YV2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Zc3hc1Q80YV2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Zc3hc1Q80YV2 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.42■■□□□ 1.82
Zc3hc1Q80YV2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Zc3hc1Q80YV2 Gm23366-201ENSMUST00000175022 89 ntBASIC26.4■■□□□ 1.82
Zc3hc1Q80YV2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Zc3hc1Q80YV2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Zc3hc1Q80YV2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Zc3hc1Q80YV2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Zc3hc1Q80YV2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Zc3hc1Q80YV2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Zc3hc1Q80YV2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Zc3hc1Q80YV2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Zc3hc1Q80YV2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Zc3hc1Q80YV2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Zc3hc1Q80YV2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.08■■□□□ 1.77
Zc3hc1Q80YV2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Zc3hc1Q80YV2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Zc3hc1Q80YV2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.04■■□□□ 1.76
Zc3hc1Q80YV2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Zc3hc1Q80YV2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Zc3hc1Q80YV2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Zc3hc1Q80YV2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Zc3hc1Q80YV2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Zc3hc1Q80YV2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Zc3hc1Q80YV2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Zc3hc1Q80YV2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Zc3hc1Q80YV2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Zc3hc1Q80YV2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Zc3hc1Q80YV2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Zc3hc1Q80YV2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Zc3hc1Q80YV2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
Zc3hc1Q80YV2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.58■■□□□ 1.69
Zc3hc1Q80YV2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Zc3hc1Q80YV2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Zc3hc1Q80YV2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Zc3hc1Q80YV2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Zc3hc1Q80YV2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Zc3hc1Q80YV2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Zc3hc1Q80YV2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Zc3hc1Q80YV2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Zc3hc1Q80YV2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Zc3hc1Q80YV2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Zc3hc1Q80YV2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.25■■□□□ 1.63
Zc3hc1Q80YV2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Zc3hc1Q80YV2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Zc3hc1Q80YV2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Zc3hc1Q80YV2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Zc3hc1Q80YV2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Zc3hc1Q80YV2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Zc3hc1Q80YV2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.11■■□□□ 1.61
Zc3hc1Q80YV2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Zc3hc1Q80YV2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Zc3hc1Q80YV2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Zc3hc1Q80YV2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 232 ms