RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	CACNG6	Q9BXT2	260 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	ROGDI	Q9GZN7	287 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	BCO1	Q9HAY6	547 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	SERHL	Q9NQF3	203 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	GLRX2	Q9NS18	164 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	CBLN4	Q9NTU7	201 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	C14orf119	Q9NWQ9	140 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	MS4A12	Q9NXJ0	267 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	BFAR	Q9NZS9	450 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	PCDHGB1	Q9Y5G3	927 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	NCKAP5	O14513	1909 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	CMYA5	Q8N3K9	4069 aa		4.16	□□□□□ -1.74
SCFD1-223	ENST00000557076	GOLGA8Q	A0A0J9YX86	632 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	MACROD2	A1Z1Q3	448 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	GOLGA8O	A6NCC3	632 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	GOLGA6L9	A6NEM1	432 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ANKDD1B	A6NHY2	528 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	GOLGA8K	D6RF30	607 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076		E7EVH7	732 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	GOLGA8N	F8WBI6	632 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	GOLGA8T	H3BQL2	631 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	GOLGA8R	I6L899	631 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	MGST3	O14880	152 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	SMAD9	O15198	467 aa	Known RBP	4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	FGF17	O60258	216 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	RAMP1	O60894	148 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	GPR75	O95800	540 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	CLPS	P04118	112 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	LPL	P06858	475 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	APRT	P07741	180 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	C1GALT1C1L	P0DN25	315 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	FCGR2A	P12318	317 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ALOX15	P16050	662 aa	Predicted RBP	4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF23	P17027	643 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	GNAZ	P19086	355 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	PCMT1	P22061	227 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	GCSH	P23434	173 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ATP5A1	P25705	553 aa	Known RBP	4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ABCD3	P28288	659 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	MARCKSL1	P49006	195 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	RGS4	P49798	205 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	NEK2	P51955	445 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ARFIP2	P53365	341 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	SUCLG1	P53597	346 aa	Known RBP	4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	B3GALT5-AS1	P59052	145 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	HILS1	P60008	231 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	RAP2B	P61225	183 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	RPS13	P62277	151 aa	Known RBP	4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	HERVK_113	P63132	956 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ERVK-8	P63133	956 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	CRADD	P78560	199 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	PLIN5	Q00G26	463 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ID2	Q02363	134 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	BSPH1	Q075Z2	132 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF844	Q08AG5	666 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	PON3	Q15166	354 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	STX1A	Q16623	288 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	UGT2A3	Q6UWM9	527 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	THOC6	Q86W42	341 aa	Known RBP	4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR4N5	Q8IXE1	308 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	CPNE9	Q8IYJ1	553 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	KRT78	Q8N1N4	520 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	OTUD6B	Q8N6M0	293 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ACOT4	Q8N9L9	421 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	SNX31	Q8N9S9	440 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	BBOF1	Q8ND07	529 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	KBTBD8	Q8NFY9	601 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	RDH11	Q8TC12	318 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	SCARB1	Q8WTV0	552 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	HGD	Q93099	445 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	S100PBP	Q96BU1	408 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	RAX2	Q96IS3	184 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	VPS39	Q96JC1	886 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	TSNARE1	Q96NA8	513 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	FOXN4	Q96NZ1	517 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	HBEGF	Q99075	208 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	DHRS9	Q9BPW9	319 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	MAPKAP1	Q9BPZ7	522 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	BPIFA3	Q9BQP9	254 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	PELO	Q9BRX2	385 aa	Known RBP	4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	TBCD	Q9BTW9	1192 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	PINK1	Q9BXM7	581 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ERVK-6	Q9BXR3	956 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	TRIM54	Q9BYV2	358 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	NAT10	Q9H0A0	1025 aa	Known RBP	4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	CCDC68	Q9H2F9	335 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	RPF2	Q9H7B2	306 aa	Known RBP	4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	METTL7A	Q9H8H3	244 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ARL15	Q9NXU5	204 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	MOCS1	Q9NZB8	636 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZIM2	Q9NZV7	527 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	FAM30A	Q9NZY2	134 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	ERVK-19	Q9WJR5	959 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	SLC22A14	Q9Y267	594 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	SPACA6	W5XKT8	324 aa		4.15	□□□□□ -1.75
SCFD1-223	ENST00000557076	TENM3	Q9P273	2699 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	IGHV4-61	A0A0C4DH41	118 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	LOC390937	A0A1W2PQ73	354 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	MAGEB16	A2A368	324 aa		4.14	□□□□□ -1.75

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