RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 SERPINA3P01011 423 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 KIR2DL1P43626 348 aaPredicted RBP13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 GIPRP48546 466 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 DAPP51397 102 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 SCN1BQ07699 218 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 CCINQ13939 588 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 ELOAQ14241 798 aaKnown RBP13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 ZFP41Q8N8Y5 198 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 DTX3Q8N9I9 347 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 RPL3LQ92901 407 aaKnown RBP13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 CMKLR1Q99788 373 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 PRR14Q9BWN1 585 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 PIGUQ9H490 435 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 ZNF224Q9NZL3 707 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 PADI2Q9Y2J8 665 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 SNX11Q9Y5W9 270 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 ITIH1P19827 911 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 SLC15A1P46059 708 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 PLGLB1Q02325 96 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 SPCS2Q15005 226 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 TRMT12Q53H54 448 aaKnown RBP13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 MFSD12Q6NUT3 480 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 KRT77Q7Z794 578 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 ANKK1Q8NFD2 765 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 OR6T1Q8NGN1 323 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 FKBP10Q96AY3 582 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 SLCO4A1Q96BD0 722 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 GABRG3Q99928 467 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 CBLCQ9ULV8 474 aa13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 ZNF443Q9Y2A4 671 aaPredicted RBP13.26□□□□□ -0.29
SHROOM1-203ENST00000378679 SLC22A31A6NKX4 558 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 SSTR4P31391 388 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 SNRPD2P62316 118 aaKnown RBP13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 TBPL2Q6SJ96 375 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 ZNF367Q7RTV3 350 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 BAHD1Q8TBE0 780 aaPredicted RBP13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 COX14Q96I36 57 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 BMFQ96LC9 184 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 PAK1IP1Q9NWT1 392 aaPredicted RBP13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 CTNSO60931 367 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 KHDRBS3O75525 346 aaKnown RBP13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 CER1O95813 267 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 SLC35E2P0CK97 266 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 TEAD1P28347 426 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 KCNJ5P48544 419 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 DGLUCYQ7Z3D6 616 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 SPARTQ8N0X7 666 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 SMRP1Q8NCR6 262 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 AGBL5Q8NDL9 886 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 TBC1D15Q8TC07 691 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 DNAJA4Q8WW22 397 aaPredicted RBP13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 GATAD2BQ8WXI9 593 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 BPIFA2Q96DR5 249 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 LAMP5Q9UJQ1 280 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 PTRH2Q9Y3E5 179 aaKnown RBP13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 MTCH2Q9Y6C9 303 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 ZSCAN5BA6NJL1 495 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 SCRG1O75711 98 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 ARL6IP5O75915 188 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 PSKH1P11801 424 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 FUT1P19526 365 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 C21orf33P30042 268 aaPredicted RBP13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 CTXN1P60606 82 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 PPP3R1P63098 170 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 SNTA1Q13424 505 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 KCNAB1Q14722 419 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 MANEAQ5SRI9 462 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 TMEM64Q6YI46 380 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 ANKRD13BQ86YJ7 626 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 LNX2Q8N448 690 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 LINC01555Q8NAE3 123 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 NRTNQ99748 197 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 LCTP09848 1927 aa13.25□□□□□ -0.29
SHROOM1-203ENST00000378679 NDUFB2O95178 105 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 GASTP01350 101 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 MAOAP21397 527 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 CRHBPP24387 322 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 PPP2R2BQ00005 443 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 ZP2Q05996 745 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 ARHGAP11AQ6P4F7 1023 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 HMGCLL1Q8TB92 370 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 SGCDQ92629 289 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 PPP1R14AQ96A00 147 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 SAP130Q9H0E3 1048 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 SLC6A20Q9NP91 592 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 UBQLN4Q9NRR5 601 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 SLC6A13Q9NSD5 602 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 DKKL1Q9UK85 242 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 CEP250Q9BV73 2442 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 TRPM7Q96QT4 1865 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 FMO6PO60774 539 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 ENTPD6O75354 484 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 CPNE6O95741 557 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 VASPP50552 380 aaPredicted RBP13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 GARNL3Q5VVW2 1013 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 FCRLBQ6BAA4 426 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 OR5M10Q6IEU7 315 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 NSMAFQ92636 917 aa13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 MRPL39Q9NYK5 338 aaKnown RBP13.24□□□□□ -0.29
SHROOM1-203ENST00000378679 CACNA1IQ9P0X4 2223 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms