RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Olfr1276Q8VF40 312 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Lims1Q99JW4 325 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Mien1Q9CQ86 115 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Zbtb8aQ9CWH1 434 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Mrpl19Q9D338 292 aaKnown RBP9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 PirQ9D711 290 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Acss2Q9QXG4 701 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Sned1Q70E20 1403 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm35911A0A1D5RLS7 214 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Prss51A0A286YDY8 319 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Acp4D3YTS9 425 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm9008E9PVG0 424 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Efna5O08543 228 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Dnajb6O54946 365 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 SrcP05480 541 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Nutf2P61971 127 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 ElobP62869 118 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 NfybP63139 207 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 HbegfQ06186 208 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 CluQ06890 448 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm14226Q3TZL0 686 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Cdh12Q5RJH3 794 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Sntb2Q61235 520 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Dcaf15Q6PFH3 600 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Syt14Q7TN84 555 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Znf770Q8BIQ8 705 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Shc2Q8BMC3 573 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Svs2Q8BS30 375 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Peli2Q8BST6 419 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Rnf26Q8BUH7 424 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Pqlc3Q8C6U2 202 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 SynpoQ8CC35 929 aaKnown RBP9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Anapc10Q8K2H6 185 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Abhd17cQ8VCV1 320 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Ppa2Q91VM9 330 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 DcxrQ91X52 244 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 AspnQ99MQ4 373 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Ndufa2Q9CQ75 99 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gfod2Q9CYH5 385 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Kcne2Q9D808 123 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Xrn2Q9DBR1 951 aaKnown RBP9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Prl5a1Q9JII2 230 aa9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Nup205A0A0J9YUD5 2061 aaKnown RBP9.17□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 H2al1jA2BFR3 109 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Calhm1D3Z291 348 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm20828J3KMI7 228 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Calhm3J3QMI4 347 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Fpr-rs3O88537 343 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Cdc6O89033 562 aaKnown RBP9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 H2-Q10P01898 325 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 P04213 122 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Cyp17a1P27786 507 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 WarsP32921 481 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Fam187bQ0VAY3 358 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Hif3aQ0VBL6 662 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Lrrc28Q3TX51 367 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Cntn2Q61330 1040 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 SrmsQ62270 496 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Tead4Q62296 427 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Pou4f2Q63934 411 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Tas2r140Q7TQA4 312 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Tmem11Q8BK08 190 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Phf11aQ8BVM9 293 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gpr21Q8BX79 349 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Fam120cQ8C3F2 1091 aaKnown RBP9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Lrrc56Q8K375 552 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Olfr935Q8VG16 308 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Trex1Q91XB0 314 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Cdkn2aipnlQ9D211 116 aaKnown RBP9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Nipa2Q9JJC8 359 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Thsd1Q9JM61 851 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Pex14Q9R0A0 376 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Dock1Q8BUR4 1865 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Spata6lB2RV46 347 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm4302E9PX25 294 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Il1r2P27931 410 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Pou3f3P31361 497 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Ndufs6P52503 116 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 PitpnbP53811 271 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Klhl8P59280 629 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Cuzd1P70412 606 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Snai2P97469 269 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Acp5Q05117 327 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Acss3Q14DH7 682 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Pnrc1Q3TWH3 297 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 RgmaQ6PCX7 454 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Tas2r129Q7M709 320 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Q8BG31 207 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 GnalQ8CGK7 381 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Vmn1r189Q8K3N3 312 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Il31raQ8K5B1 716 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 NrmQ8VC65 262 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Ugt2b37Q8VCN3 530 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Pcyox1Q9CQF9 505 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Ebna1bp2Q9D903 306 aaKnown RBP9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 TheglQ9DA15 459 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Prl8a6Q9DAY2 240 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 SrpraQ9DBG7 636 aaKnown RBP9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 9530002B09RikQ9EPV7 135 aa9.16□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Smco4Q9JIS3 59 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms