RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 GPLD1P80108 840 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 SYT6Q5T7P8 510 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 KANSL1Q7Z3B3 1105 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 B3GNT7Q8NFL0 401 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 TMEM255BQ8WV15 326 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 CCDC74AQ96AQ1 378 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 FAM46AQ96IP4 442 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 PHOX2BQ99453 314 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 PLA2G12AQ9BZM1 189 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 DSN1Q9H410 356 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 ANKRD19PQ9H560 264 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 EGLN3Q9H6Z9 239 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 SEMA5BQ9P283 1151 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 NCDNQ9UBB6 729 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 ERVK-19Q9WJR5 959 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 KHNYNO15037 678 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 MPZL2O60487 215 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 PSMB9P28065 219 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 SH3BGRP55822 239 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 CARFQ8N187 725 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 RAB2BQ8WUD1 216 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 MYDGFQ969H8 173 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 SLC41A2Q96JW4 573 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 YIPF2Q9BWQ6 316 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 SLC7A7Q9UM01 511 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 PIP5K1CO60331 668 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 NOL3O60936 208 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 ENTPD6O75354 484 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 IFNA16P05015 189 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 EPHA8P29322 1005 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 GCGRP47871 477 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 SNRPGP62308 76 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 FUT7Q11130 342 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 GINS1Q14691 196 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 NNATQ16517 81 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 DECR1Q16698 335 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 FLYWCH1Q4VC44 716 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 ACSM5Q6NUN0 579 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 TMPRSS9Q7Z410 1059 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 BCDIN3DQ7Z5W3 292 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 DRAXINQ8NBI3 349 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 RCBTB1Q8NDN9 531 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 C16orf52Q8NHV5 167 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 GNPDA2Q8TDQ7 276 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 ACOT11Q8WXI4 607 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 POLE3Q9NRF9 147 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 ENAMQ9NRM1 1142 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 CLN6Q9NWW5 311 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 ENPP5Q9UJA9 477 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 SEC16AO15027 2179 aa15.78■□□□□ 0.12
SHKBP1-216ENST00000598201 WDR87Q6ZQQ6 2873 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 CLPSP04118 112 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 ZNF806P0C7X5 589 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 CCNA2P20248 432 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 IFNA8P32881 189 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 GIPRP48546 466 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 OCA2Q04671 838 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 SPEM2Q0P670 501 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 ST3GAL4Q11206 333 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 NFATC3Q12968 1075 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 AQP6Q13520 282 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 ZNHIT3Q15649 155 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 PDZK1Q5T2W1 519 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 TCEAL6Q6IPX3 200 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 CASP12Q6UXS9 341 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 ANKRD13BQ86YJ7 626 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 NRMQ8IXM6 262 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 OR8D4Q8NGM9 314 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 TCEAL3Q969E4 200 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 YIPF6Q96EC8 236 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 RNF31Q96EP0 1072 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 PRSS27Q9BQR3 290 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 OR10A5Q9H207 317 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 TVP23BQ9NYZ1 205 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 NLGN3Q9NZ94 848 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 DNAJC27Q9NZQ0 273 aa15.77■□□□□ 0.12
SHKBP1-216ENST00000598201 SH3D21A4FU49 640 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 PRKYO43930 277 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 PRAMEF2O60811 474 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 CT45A8P0DMV1 189 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 CT45A9P0DMV2 189 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 GSTM3P21266 225 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 EFNA3P52797 238 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 CDK5Q00535 292 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 TSPAN31Q12999 210 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 CTF1Q16619 201 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 CT45A2Q5DJT8 189 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 UBE2UQ5VVX9 321 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 WDR74Q6RFH5 385 aaPredicted RBP15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 WDR88Q6ZMY6 472 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 PRSS42Q7Z5A4 293 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 ARHGAP22Q7Z5H3 698 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 RANBP3LQ86VV4 465 aaPredicted RBP15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 TCEANCQ8N8B7 351 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 ZNF615Q8N8J6 731 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 PIGXQ8TBF5 258 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 CNOT9Q92600 299 aaKnown RBP15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 PTCHD1Q96NR3 888 aa15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 GPN2Q9H9Y4 310 aaPredicted RBP15.77■□□□□ 0.11
SHKBP1-216ENST00000598201 SLC25A19Q9HC21 320 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms