RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ERVK11-1P61568 191 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 RBBP4Q09028 425 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 RTP5Q14D33 572 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 RBBP7Q16576 425 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 CTU2Q2VPK5 515 aaKnown RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 GXYLT1Q4G148 440 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 PIGGQ5H8A4 983 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 FAM90A2PQ658T7 463 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 OR52E8Q6IFG1 317 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 CCDC144NLQ6NUI1 221 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 NIPA1Q7RTP0 329 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 SSX9Q7RTT3 188 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 HAPLN4Q86UW8 402 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 KCNMB4Q86W47 210 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 CBWD2Q8IUF1 395 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 PUSL1Q8N0Z8 303 aaKnown RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 GPC2Q8N158 579 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 METTL4Q8N3J2 472 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 SLC5A8Q8N695 610 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 CDRT4Q8N9R6 151 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 CCDC71LQ8N9Z2 235 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 VANGL1Q8TAA9 524 aaPredicted RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 RNF133Q8WVZ7 376 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 P2RX5Q93086 422 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 SLC35C1Q96A29 364 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 ECHDC3Q96DC8 303 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 CRAMP1Q96RY5 1269 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 DPH7Q9BTV6 452 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 RSG1Q9BU20 258 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 NEUROG2Q9H2A3 272 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 PIGMQ9H3S5 423 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 RAD18Q9NS91 495 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 P2RX2Q9UBL9 471 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 PSORS1C1Q9UIG5 152 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 ZNF225Q9UK10 706 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 NDRG4Q9ULP0 352 aaKnown RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 YIPF1Q9Y548 306 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 A0A1B0GUS0 222 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 PRSS46E5RG02 174 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 NEDD8-MDP1E9PL57 170 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 ZNF205O95201 554 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 VAPBO95292 243 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 PAPSS2O95340 614 aaPredicted RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 GCP02774 474 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 TFP02787 698 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 AMHP03971 560 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 SERPINA5P05154 406 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 KLK3P07288 261 aaPredicted RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 TCP1P17987 556 aaKnown RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 FBLN1P23142 703 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 MMP11P24347 488 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 IGFBP5P24593 272 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 STOMP27105 288 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 CD82P27701 267 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 NMBRP28336 390 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 CRHR1P34998 444 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 BTDP43251 543 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 HOXA1P49639 335 aaPredicted RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 GPR143P51810 404 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 NAA20P61599 178 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 GNG11P61952 73 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 IRX4P78413 519 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 SLC34A1Q06495 639 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 SRSF1Q07955 248 aaKnown RBP eCLIP4.41□□□□□ -1.7
SMG1-207ENST00000563235 ST3GAL1Q11201 340 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 TOMM34Q15785 309 aaPredicted RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 VAMP3Q15836 100 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 C11orf63Q6NUN7 778 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 NOXA1Q86UR1 476 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 IGFN1Q86VF2 1251 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 ATP6V0D2Q8N8Y2 350 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 OR2D3Q8NGH3 330 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 GDPD5Q8WTR4 605 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 MSI2Q96DH6 328 aaKnown RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 DYDC2Q96IM9 177 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 RNF170Q96K19 258 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 WFIKKN1Q96NZ8 548 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 DDOQ99489 341 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 NIPSNAP1Q9BPW8 284 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 TSSK1BQ9BXA7 367 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 TM6SF1Q9BZW5 370 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 NMUR2Q9GZQ4 415 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 HAPLN2Q9GZV7 340 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 GANQ9H2C0 597 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 PARD6AQ9NPB6 346 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 CD320Q9NPF0 282 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 TEX10Q9NXF1 929 aaPredicted RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 ZNF346Q9UL40 294 aaKnown RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 SORCS3Q9UPU3 1222 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 SLC22A13Q9Y226 551 aa4.41□□□□□ -1.7
SMG1-207ENST00000563235 REXO2Q9Y3B8 237 aaKnown RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 POLR3HQ9Y535 204 aaPredicted RBP4.41□□□□□ -1.7
SMG1-207ENST00000563235 KAT6AQ92794 2004 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 PKD1L3Q7Z443 1732 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 TEX13DA0A0J9YY54 714 aaPredicted RBP4.4□□□□□ -1.7
SMG1-207ENST00000563235 SH3PXD2BA1X283 911 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 YY2O15391 372 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 FADS2O95864 444 aaKnown RBP4.4□□□□□ -1.7
SMG1-207ENST00000563235 CD5P06127 495 aa4.4□□□□□ -1.7
SMG1-207ENST00000563235 NBEAP1P0C6P0 100 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms