RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 PCNX3Q9H6A9 2034 aa27.4■■□□□ 1.98
SSSCA1-207ENST00000533115 LINC01387J3KSC0 135 aa27.39■■□□□ 1.98
SSSCA1-207ENST00000533115 SOX30O94993 753 aa27.39■■□□□ 1.98
SSSCA1-207ENST00000533115 ASCL1P50553 236 aa27.39■■□□□ 1.98
SSSCA1-207ENST00000533115 DGKQP52824 942 aa27.39■■□□□ 1.98
SSSCA1-207ENST00000533115 GLYR1Q49A26 553 aaPredicted RBP27.39■■□□□ 1.98
SSSCA1-207ENST00000533115 OR8J2Q8NGG1 315 aa27.39■■□□□ 1.98
SSSCA1-207ENST00000533115 OR5AK3PQ8NH89 298 aa27.39■■□□□ 1.98
SSSCA1-207ENST00000533115 WNT2BQ93097 391 aa27.39■■□□□ 1.98
SSSCA1-207ENST00000533115 TM9SF2Q99805 663 aa27.39■■□□□ 1.98
SSSCA1-207ENST00000533115 PIGQQ9BRB3 760 aa27.39■■□□□ 1.98
SSSCA1-207ENST00000533115 CLCF1Q9UBD9 225 aa27.39■■□□□ 1.98
SSSCA1-207ENST00000533115 KCNN3Q9UGI6 736 aa27.39■■□□□ 1.98
SSSCA1-207ENST00000533115 ZNF337Q9Y3M9 751 aa27.39■■□□□ 1.98
SSSCA1-207ENST00000533115 SYT5O00445 386 aa27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 GMFGO60234 142 aa27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 SNNO75324 88 aaPredicted RBP27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 HPGDP15428 266 aa27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 POU3F2P20265 443 aaPredicted RBP27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 OPRM1P35372 400 aa27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 SOAT1P35610 550 aa27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 BHLHB9Q6PI77 547 aa27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 CLECL1Q8IZS7 167 aa27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 OR5M1Q8NGP8 315 aa27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 GOT1L1Q8NHS2 421 aaPredicted RBP27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 LRRC46Q96FV0 321 aa27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 MCCC2Q9HCC0 563 aa27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 PDZD2O15018 2839 aa27.38■■□□□ 1.97
SSSCA1-207ENST00000533115 OR2M5A3KFT3 312 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 RNASET2O00584 256 aaKnown RBP27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 SCDO00767 359 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 RCBTB2O95199 551 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 IL18BPO95998 194 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 TMIGD3P0DMS9 266 aaPredicted RBP27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 AGFG1P52594 562 aaKnown RBP27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 FBXL19-AS1Q494R0 122 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 ATG16L1Q676U5 607 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 OGFOD2Q6N063 350 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 ARSKQ6UWY0 536 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 PLXDC2Q6UX71 529 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 GATSQ8NAP1 163 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 RAB3IL1Q8TBN0 382 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 ZFP3Q96NJ6 502 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 SH3GL2Q99962 352 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 L3MBTL1Q9Y468 752 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 KCNE3Q9Y6H6 103 aa27.37■■□□□ 1.97
SSSCA1-207ENST00000533115 CSMD2Q7Z408 3487 aa27.36■■□□□ 1.97
SSSCA1-207ENST00000533115 A0A1W2PQD3 144 aa27.36■■□□□ 1.97
SSSCA1-207ENST00000533115 ANKRD28O15084 1053 aa27.36■■□□□ 1.97
SSSCA1-207ENST00000533115 HCRTR2O43614 444 aa27.36■■□□□ 1.97
SSSCA1-207ENST00000533115 ATP6V1C1P21283 382 aa27.36■■□□□ 1.97
SSSCA1-207ENST00000533115 UQCRC1P31930 480 aa27.36■■□□□ 1.97
SSSCA1-207ENST00000533115 CASP8Q14790 479 aa27.36■■□□□ 1.97
SSSCA1-207ENST00000533115 DCST2Q5T1A1 773 aa27.36■■□□□ 1.97
SSSCA1-207ENST00000533115 MISPQ8IVT2 679 aa27.36■■□□□ 1.97
SSSCA1-207ENST00000533115 UBQLNLQ8IYU4 475 aa27.36■■□□□ 1.97
SSSCA1-207ENST00000533115 MEIOBQ8N635 442 aa27.36■■□□□ 1.97
SSSCA1-207ENST00000533115 TESCQ96BS2 214 aa27.36■■□□□ 1.97
SSSCA1-207ENST00000533115 SDHDO14521 159 aa27.35■■□□□ 1.97
SSSCA1-207ENST00000533115 KRTAP10-9P60411 292 aa27.35■■□□□ 1.97
SSSCA1-207ENST00000533115 FOXF2Q12947 444 aa27.35■■□□□ 1.97
SSSCA1-207ENST00000533115 TMEM44Q2T9K0 475 aa27.35■■□□□ 1.97
SSSCA1-207ENST00000533115 CHMP1BQ7LBR1 199 aa27.35■■□□□ 1.97
SSSCA1-207ENST00000533115 GRAMD2AQ8IUY3 354 aa27.35■■□□□ 1.97
SSSCA1-207ENST00000533115 RNASE6Q93091 150 aaKnown RBP27.35■■□□□ 1.97
SSSCA1-207ENST00000533115 OR7D2Q96RA2 312 aa27.35■■□□□ 1.97
SSSCA1-207ENST00000533115 ZNF559Q9BR84 538 aa27.35■■□□□ 1.97
SSSCA1-207ENST00000533115 HOXD1Q9GZZ0 328 aa27.35■■□□□ 1.97
SSSCA1-207ENST00000533115 MANSC1Q9H8J5 431 aa27.35■■□□□ 1.97
SSSCA1-207ENST00000533115 PCDHGB4Q9UN71 923 aa27.35■■□□□ 1.97
SSSCA1-207ENST00000533115 VDAC3Q9Y277 283 aa27.35■■□□□ 1.97
SSSCA1-207ENST00000533115 H3BML4 177 aa27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 HDAC3O15379 428 aa27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 SCN2BO60939 215 aa27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 CLNS1AP54105 237 aaKnown RBP27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 CLDN15P56746 228 aa27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 EEFSECP57772 596 aaKnown RBP27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 MYBPHQ13203 477 aa27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 ANXA8L1Q5VT79 327 aa27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 C6orf120Q7Z4R8 191 aa27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 VPS37AQ8NEZ2 397 aa27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 OR4A15Q8NGL6 344 aa27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 INTS12Q96CB8 462 aaKnown RBP27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 SFXN3Q9BWM7 321 aa27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 MARCOQ9UEW3 520 aaPredicted RBP27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 FOXD3Q9UJU5 478 aaPredicted RBP27.34■■□□□ 1.97
SSSCA1-207ENST00000533115 A0A087WZY1 265 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 PRSS51A0A1B0GVH4 220 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 TRPC5OSA6NMA1 111 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 SHISA8B8ZZ34 492 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 ALDOCP09972 364 aaKnown RBP27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 PEX19P40855 299 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 SUCLG1P53597 346 aaKnown RBP27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 PHC1P78364 1004 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 CD226Q15762 336 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 DPY19L1Q2PZI1 675 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 LURAP1LQ8IV03 231 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 WDR75Q8IWA0 830 aaKnown RBP27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 CLEC4FQ8N1N0 589 aa27.33■■□□□ 1.97
SSSCA1-207ENST00000533115 ZNF527Q8NB42 609 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms