RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 CASP8Q14790 479 aa16.64■□□□□ 0.25
HOXD11-202ENST00000498438 POMZP3Q6PJE2 187 aa16.64■□□□□ 0.25
HOXD11-202ENST00000498438 LRRC34Q8IZ02 419 aa16.64■□□□□ 0.25
HOXD11-202ENST00000498438 OR5M1Q8NGP8 315 aa16.64■□□□□ 0.25
HOXD11-202ENST00000498438 ADAMTS15Q8TE58 950 aa16.64■□□□□ 0.25
HOXD11-202ENST00000498438 LURAP1Q96LR2 239 aa16.64■□□□□ 0.25
HOXD11-202ENST00000498438 UBQLN4Q9NRR5 601 aa16.64■□□□□ 0.25
HOXD11-202ENST00000498438 CLCF1Q9UBD9 225 aa16.64■□□□□ 0.25
HOXD11-202ENST00000498438 ZNF629Q9UEG4 869 aaPredicted RBP16.64■□□□□ 0.25
HOXD11-202ENST00000498438 MARCOQ9UEW3 520 aaPredicted RBP16.64■□□□□ 0.25
HOXD11-202ENST00000498438 RNASET2O00584 256 aaKnown RBP16.63■□□□□ 0.25
HOXD11-202ENST00000498438 SDHDO14521 159 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 ANKRD28O15084 1053 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 HPGDP15428 266 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 ASCL1P50553 236 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 DGKQP52824 942 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 DLX5P56178 289 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 DCST2Q5T1A1 773 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 OGFOD2Q6N063 350 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 ARSKQ6UWY0 536 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 UBQLNLQ8IYU4 475 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 OR8J2Q8NGG1 315 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 UCN2Q96RP3 112 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 SH3GL2Q99962 352 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 PIGQQ9BRB3 760 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 ZNF337Q9Y3M9 751 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 KCNE3Q9Y6H6 103 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 PDZD2O15018 2839 aa16.63■□□□□ 0.25
HOXD11-202ENST00000498438 OR2M5A3KFT3 312 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 SCDO00767 359 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 ALDOCP09972 364 aaKnown RBP16.62■□□□□ 0.25
HOXD11-202ENST00000498438 TMIGD3P0DMS9 266 aaPredicted RBP16.62■□□□□ 0.25
HOXD11-202ENST00000498438 KITP10721 976 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 PEPDP12955 493 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 ATP6V1C1P21283 382 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 CTSSP25774 331 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 AGFG1P52594 562 aaKnown RBP16.62■□□□□ 0.25
HOXD11-202ENST00000498438 RPS26P62854 115 aaKnown RBP16.62■□□□□ 0.25
HOXD11-202ENST00000498438 BCL2A1Q16548 175 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 ATG16L1Q676U5 607 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 BHLHB9Q6PI77 547 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 ANKRD46Q86W74 232 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 CLEC4FQ8N1N0 589 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 OR5D16Q8NGK9 328 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 OR4A15Q8NGL6 344 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 RAB3IL1Q8TBN0 382 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 WNT2BQ93097 391 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 TESCQ96BS2 214 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 OR7D2Q96RA2 312 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 TM9SF2Q99805 663 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 SERHL2Q9H4I8 314 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 MANSC1Q9H8J5 431 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 VDAC3Q9Y277 283 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 L3MBTL1Q9Y468 752 aa16.62■□□□□ 0.25
HOXD11-202ENST00000498438 NPIPA5A0A0B4J1W7 369 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 RNF103-CHMP3A0A140T963 221 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 A0A1W2PQD3 144 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 SHISA8B8ZZ34 492 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 NPIPA7E9PJI5 369 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 H0YC42 278 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 H3BML4 177 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 LINC01387J3KSC0 135 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 HDAC3O15379 428 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 HCRTR2O43614 444 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 SCN2BO60939 215 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 NPIPA8P0DM63 369 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 EPHA3P29320 983 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 UQCRC1P31930 480 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 OPRM1P35372 400 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 CLNS1AP54105 237 aaKnown RBP16.61■□□□□ 0.25
HOXD11-202ENST00000498438 TPD52P55327 224 aaPredicted RBP16.61■□□□□ 0.25
HOXD11-202ENST00000498438 KRTAP10-9P60411 292 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 PHC1P78364 1004 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 OCRLQ01968 901 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 FOXF2Q12947 444 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 SNTB1Q13884 538 aaKnown RBP16.61■□□□□ 0.25
HOXD11-202ENST00000498438 CD226Q15762 336 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 GLYR1Q49A26 553 aaPredicted RBP16.61■□□□□ 0.25
HOXD11-202ENST00000498438 SPANXN4Q5MJ08 99 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 GRAMD2AQ8IUY3 354 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 MISPQ8IVT2 679 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 MEIOBQ8N635 442 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 GOT1L1Q8NHS2 421 aaPredicted RBP16.61■□□□□ 0.25
HOXD11-202ENST00000498438 SH3YL1Q96HL8 342 aaPredicted RBP16.61■□□□□ 0.25
HOXD11-202ENST00000498438 ZFP3Q96NJ6 502 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 WDR55Q9H6Y2 383 aaPredicted RBP16.61■□□□□ 0.25
HOXD11-202ENST00000498438 MCCC2Q9HCC0 563 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 HHATLQ9HCP6 504 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 AIG1Q9NVV5 245 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 KCNN3Q9UGI6 736 aa16.61■□□□□ 0.25
HOXD11-202ENST00000498438 GOLGA8QA0A0J9YX86 632 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 GOLGA8OA6NCC3 632 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 TRPC5OSA6NMA1 111 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 EEF1E1-BLOC1S5C9J1V9 151 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 E9PBE3 544 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 GOLGA8NF8WBI6 632 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 SYT5O00445 386 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 SEC14L5O43304 696 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 EEF1E1O43324 174 aaKnown RBP16.6■□□□□ 0.25
HOXD11-202ENST00000498438 SOX30O94993 753 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms