RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 FAF1Q9UNN5 650 aaPredicted RBP10.12□□□□□ -0.79
CKS1B-206ENST00000474215 ZNF337Q9Y3M9 751 aa10.12□□□□□ -0.79
CKS1B-206ENST00000474215 FREM3P0C091 2139 aa10.12□□□□□ -0.79
CKS1B-206ENST00000474215 CACNA1CQ13936 2221 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 OR2M5A3KFT3 312 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 ENO4A6NNW6 628 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 GMFGO60234 142 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 RCBTB2O95199 551 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 IL18BPO95998 194 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 TMIGD3P0DMS9 266 aaPredicted RBP10.11□□□□□ -0.79
CKS1B-206ENST00000474215 POU3F2P20265 443 aaPredicted RBP10.11□□□□□ -0.79
CKS1B-206ENST00000474215 CAPN3P20807 821 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 UQCRC1P31930 480 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 ASCL1P50553 236 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 AGFG1P52594 562 aaKnown RBP10.11□□□□□ -0.79
CKS1B-206ENST00000474215 EEFSECP57772 596 aaKnown RBP10.11□□□□□ -0.79
CKS1B-206ENST00000474215 MYBPHQ13203 477 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 FBXL19-AS1Q494R0 122 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 OR4F3Q6IEY1 312 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 BHLHB9Q6PI77 547 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 CHMP1BQ7LBR1 199 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 LURAP1LQ8IV03 231 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 OR8J2Q8NGG1 315 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 OR5M1Q8NGP8 315 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 MGARPQ8TDB4 240 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 ADAMTS15Q8TE58 950 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 TLCD1Q96CP7 247 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 ZFP3Q96NJ6 502 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 SH3GL2Q99962 352 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 ZNF559Q9BR84 538 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 HOXD1Q9GZZ0 328 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 NKIRAS1Q9NYS0 192 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 PCDHGB4Q9UN71 923 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 KCNE3Q9Y6H6 103 aa10.11□□□□□ -0.79
CKS1B-206ENST00000474215 PKDREJQ9NTG1 2253 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 MYO9AB2RTY4 2548 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 A0A087WZY1 265 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 PRSS51A0A1B0GVH4 220 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 A0A1W2PQD3 144 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 RNASET2O00584 256 aaKnown RBP10.1□□□□□ -0.79
CKS1B-206ENST00000474215 SCDO00767 359 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 ANKRD28O15084 1053 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 HDAC3O15379 428 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 HCRTR2O43614 444 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 SNNO75324 88 aaPredicted RBP10.1□□□□□ -0.79
CKS1B-206ENST00000474215 ATP6V1C1P21283 382 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 PEX19P40855 299 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 KIR2DL3P43628 341 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 CLDN15P56746 228 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 KRTAP10-9P60411 292 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 EEF1A1P68104 462 aaKnown RBP10.1□□□□□ -0.79
CKS1B-206ENST00000474215 FOXF2Q12947 444 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 TMEM44Q2T9K0 475 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 KLHL26Q53HC5 615 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 DCST2Q5T1A1 773 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 ANXA8L1Q5VT79 327 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 EEF1A1P5Q5VTE0 462 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 ATG16L1Q676U5 607 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 OGFOD2Q6N063 350 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 PLXDC2Q6UX71 529 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 C6orf120Q7Z4R8 191 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 GRAMD2AQ8IUY3 354 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 MISPQ8IVT2 679 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 UBQLNLQ8IYU4 475 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 CLECL1Q8IZS7 167 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 MEIOBQ8N635 442 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 GATSQ8NAP1 163 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 VPS37AQ8NEZ2 397 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 OR5AK3PQ8NH89 298 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 RAB3IL1Q8TBN0 382 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 ACTRT2Q8TDY3 377 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 RNASE6Q93091 150 aaKnown RBP10.1□□□□□ -0.79
CKS1B-206ENST00000474215 TESCQ96BS2 214 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 INTS12Q96CB8 462 aaKnown RBP10.1□□□□□ -0.79
CKS1B-206ENST00000474215 ACBD3Q9H3P7 528 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 MANSC1Q9H8J5 431 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 JKAMPQ9P055 326 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 CLCF1Q9UBD9 225 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 STOML1Q9UBI4 398 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 FOXD3Q9UJU5 478 aaPredicted RBP10.1□□□□□ -0.79
CKS1B-206ENST00000474215 L3MBTL1Q9Y468 752 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 AP4B1Q9Y6B7 739 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 OTOGQ6ZRI0 2925 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 HCFC1P51610 2035 aa10.1□□□□□ -0.79
CKS1B-206ENST00000474215 SLC22A20A6NK97 555 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 DUXAA6NLW8 204 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 TRPC5OSA6NMA1 111 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 EEF1E1-BLOC1S5C9J1V9 151 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 SLCO1B7G3V0H7 640 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 H3BML4 177 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 SDHDO14521 159 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 EEF1E1O43324 174 aaKnown RBP10.09□□□□□ -0.79
CKS1B-206ENST00000474215 SCN2BO60939 215 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 TNFRSF21O75509 655 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 TGM6O95932 706 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 MATN1P21941 496 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 SOAT1P35610 550 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 SUCLG1P53597 346 aaKnown RBP10.09□□□□□ -0.79
CKS1B-206ENST00000474215 CLNS1AP54105 237 aaKnown RBP10.09□□□□□ -0.79
CKS1B-206ENST00000474215 CLDN20P56880 219 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms