RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 PINK1Q9BXM7 581 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 PARD6BQ9BYG5 372 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 CENPHQ9H3R5 247 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 UBQLN4Q9NRR5 601 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 GALNT8Q9NY28 637 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 VDAC3Q9Y277 283 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 AP4B1Q9Y6B7 739 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 A0A087WZY1 265 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 A0A1W2PNV4 684 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 WDR91A4D1P6 747 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 CFLARO15519 480 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 TNFRSF21O75509 655 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 SMNDC1O75940 238 aaKnown RBP eCLIP17.77■□□□□ 0.443e-9■■■□□ 15.9
VCP-203ENST00000448530 HMGN2P05204 90 aaKnown RBP17.77■□□□□ 0.44
VCP-203ENST00000448530 KRT16P08779 473 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 ATP6V1C1P21283 382 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 ARRB2P32121 409 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 ETV4P43268 484 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 CCT3P49368 545 aaKnown RBP17.77■□□□□ 0.44
VCP-203ENST00000448530 ZNF844Q08AG5 666 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 TP53BP2Q13625 1128 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 LASP1Q14847 261 aaKnown RBP17.77■□□□□ 0.44
VCP-203ENST00000448530 SGCBQ16585 318 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 GATSQ8NAP1 163 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 OR56A1Q8NGH5 318 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 LINC01560Q8TB33 94 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 FAM110BQ8TC76 370 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 OTUB1Q96FW1 271 aaPredicted RBP17.77■□□□□ 0.44
VCP-203ENST00000448530 PKNOX2Q96KN3 472 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 BTBD2Q9BX70 525 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 DUSP22Q9NRW4 184 aa17.77■□□□□ 0.44
VCP-203ENST00000448530 SIRT3Q9NTG7 399 aaPredicted RBP17.77■□□□□ 0.44
VCP-203ENST00000448530 FAF1Q9UNN5 650 aaPredicted RBP17.77■□□□□ 0.44
VCP-203ENST00000448530 AKAP6Q13023 2319 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 SERPINE1P05121 402 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 CPOXP36551 454 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 ZNF41P51814 821 aaPredicted RBP17.76■□□□□ 0.43
VCP-203ENST00000448530 CLDN20P56880 219 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 CHI3L2Q15782 390 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 CCNJQ5T5M9 372 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 CDC20BQ86Y33 519 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 MISPQ8IVT2 679 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 ADAMTS15Q8TE58 950 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 CDS1Q92903 461 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 NINJ1Q92982 152 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 MOAP1Q96BY2 351 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 ZIM3Q96PE6 472 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 STACQ99469 402 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 PIGUQ9H490 435 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 NEUROD4Q9HD90 331 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 NOP53Q9NZM5 478 aaKnown RBP17.76■□□□□ 0.43
VCP-203ENST00000448530 NDRG3Q9UGV2 375 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 ZNF175Q9Y473 711 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 HIVEP1P15822 2718 aa17.76■□□□□ 0.43
VCP-203ENST00000448530 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 FAM221AA4D161 298 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 A8MXE2 369 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 H0YC42 278 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 MSTNO14793 375 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 TM9SF1O15321 606 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 BIRC5O15392 142 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 ZNF500O60304 480 aaPredicted RBP17.75■□□□□ 0.43
VCP-203ENST00000448530 TNFSF13O75888 250 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 SOX30O94993 753 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 C6orf47O95873 294 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 MYZAPP0CAP1 466 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 FCGR2AP12318 317 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 ZNF17P17021 662 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 SUCLG1P53597 346 aaKnown RBP17.75■□□□□ 0.43
VCP-203ENST00000448530 IST1P53990 364 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 TPD52P55327 224 aaPredicted RBP17.75■□□□□ 0.43
VCP-203ENST00000448530 CLDN15P56746 228 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 PDCD2Q16342 344 aaPredicted RBP17.75■□□□□ 0.43
VCP-203ENST00000448530 PPP4R4Q6NUP7 873 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 CDC73Q6P1J9 531 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 ZAR1Q86SH2 424 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 KRTCAP2Q8N6L1 136 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 ZNF527Q8NB42 609 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 FIG4Q92562 907 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 COQ8BQ96D53 544 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 SH3YL1Q96HL8 342 aaPredicted RBP17.75■□□□□ 0.43
VCP-203ENST00000448530 ACTRT3Q9BYD9 372 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 PRRG4Q9BZD6 226 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 BHLHE41Q9C0J9 482 aaPredicted RBP17.75■□□□□ 0.43
VCP-203ENST00000448530 SSU72Q9NP77 194 aaKnown RBP17.75■□□□□ 0.43
VCP-203ENST00000448530 GIN1Q9NXP7 522 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 ST6GALNAC2Q9UJ37 374 aa17.75■□□□□ 0.43
VCP-203ENST00000448530 NUP214P35658 2090 aaPredicted RBP17.75■□□□□ 0.43
VCP-203ENST00000448530 UQCRHLA0A096LP55 91 aa17.74■□□□□ 0.43
VCP-203ENST00000448530 SH3D21A4FU49 640 aa17.74■□□□□ 0.43
VCP-203ENST00000448530 SHISA8B8ZZ34 492 aa17.74■□□□□ 0.43
VCP-203ENST00000448530 CASKO14936 926 aa17.74■□□□□ 0.43
VCP-203ENST00000448530 SNUPNO95149 360 aaKnown RBP17.74■□□□□ 0.43
VCP-203ENST00000448530 GOSR1O95249 250 aa17.74■□□□□ 0.43
VCP-203ENST00000448530 G6PDP11413 515 aa17.74■□□□□ 0.43
VCP-203ENST00000448530 DNASE1P24855 282 aa17.74■□□□□ 0.43
VCP-203ENST00000448530 SOAT1P35610 550 aa17.74■□□□□ 0.43
VCP-203ENST00000448530 ABCE1P61221 599 aaKnown RBP17.74■□□□□ 0.43
VCP-203ENST00000448530 SIRPAP78324 504 aa17.74■□□□□ 0.43
VCP-203ENST00000448530 EMX2Q04743 252 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms