RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 PIAS2O75928 621 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 NKX2-2O95096 273 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 ZBTB11O95625 1053 aaPredicted RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 FADS2O95864 444 aaKnown RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 MMP11P24347 488 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 CALRP27797 417 aaKnown RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 PSMB9P28065 219 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 PTGER1P34995 402 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 CXCL12P48061 93 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 GABRA4P48169 554 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 MASP1P48740 699 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 AFF3P51826 1226 aaKnown RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 SMSP52788 366 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 HSD17B7P56937 341 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 C21orf59P57076 290 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 PPP1CAP62136 330 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 EEF1A1P68104 462 aaKnown RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 POU6F2P78424 691 aaPredicted RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 TSPAN31Q12999 210 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 GRM7Q14831 915 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 TMEM44Q2T9K0 475 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 TRMT12Q53H54 448 aaKnown RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 DCST2Q5T1A1 773 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 RNLSQ5VYX0 342 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 Q6ZPB1 254 aaPredicted RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 SLC16A12Q6ZSM3 486 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 PLEKHM3Q6ZWE6 761 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 ZER1Q7Z7L7 766 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 COMTD1Q86VU5 262 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 VRK2Q86Y07 508 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 MRPL41Q8IXM3 137 aaKnown RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 FAM26EQ8N5C1 309 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 OR5T3Q8NGG3 340 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 OR9A4Q8NGU2 314 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 PIGXQ8TBF5 258 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 OIT3Q8WWZ8 545 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 UBE2FQ969M7 185 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 MVB12AQ96EY5 273 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 RBM18Q96H35 190 aaKnown RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 MAP3K3Q99759 626 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 WFDC6Q9BQY6 131 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 LMF2Q9BU23 707 aaKnown RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 POLDIP3Q9BY77 421 aaKnown RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 LIN28AQ9H9Z2 209 aaKnown RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 TBC1D17Q9HA65 648 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 SLC25A19Q9HC21 320 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 MKLN1Q9UL63 735 aa6.96□□□□□ -1.29
CXCR4-202ENST00000409817 RPL36Q9Y3U8 105 aaKnown RBP6.96□□□□□ -1.29
CXCR4-202ENST00000409817 TDRD6O60522 2096 aaKnown RBP6.96□□□□□ -1.3
CXCR4-202ENST00000409817 A0A087WUU8 490 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 CCDC163A0A0D9SF12 145 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 SYNDIG1LA6NDD5 238 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 RHPN2P1A8MT19 583 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 FOXS1O43638 330 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 BRINP1O60477 761 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 DNAJB6O75190 326 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 BCAS1O75363 584 aaPredicted RBP6.96□□□□□ -1.3
CXCR4-202ENST00000409817 CDK4P11802 303 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 IL9P15248 144 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 FPR3P25089 353 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 POU1F1P28069 291 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 HOXA6P31267 233 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 STAT5AP42229 794 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 SLC15A1P46059 708 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 GPR3P46089 330 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 GSSP48637 474 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 PSMD4P55036 377 aaKnown RBP6.96□□□□□ -1.3
CXCR4-202ENST00000409817 ST3GAL4Q11206 333 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 STX4Q12846 297 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 SERTAD2Q14140 314 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 IRF3Q14653 427 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 NR1D2Q14995 579 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 CTF1Q16619 201 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 VHLLQ6RSH7 139 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 ZNF730Q6ZMV8 503 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 RASSF6Q6ZTQ3 369 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 ZNF367Q7RTV3 350 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 MRGPREQ86SM8 312 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 RNF113BQ8IZP6 322 aaKnown RBP6.96□□□□□ -1.3
CXCR4-202ENST00000409817 CLDN22Q8N7P3 220 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 TMEM52Q8NDY8 209 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 TEX47Q8TBZ9 253 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 MCHR1Q99705 422 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 DCUN1D5Q9BTE7 237 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 NAA50Q9GZZ1 169 aaKnown RBP6.96□□□□□ -1.3
CXCR4-202ENST00000409817 QRSL1Q9H0R6 528 aaKnown RBP6.96□□□□□ -1.3
CXCR4-202ENST00000409817 GSX1Q9H4S2 264 aaPredicted RBP6.96□□□□□ -1.3
CXCR4-202ENST00000409817 ANKRA2Q9H9E1 313 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 NLGN3Q9NZ94 848 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 AASSQ9UDR5 926 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 TESQ9UGI8 421 aaKnown RBP6.96□□□□□ -1.3
CXCR4-202ENST00000409817 PFDN2Q9UHV9 154 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 CHST2Q9Y4C5 530 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 REV3LO60673 3130 aa6.96□□□□□ -1.3
CXCR4-202ENST00000409817 A0A0A6YYC8 382 aaPredicted RBP6.95□□□□□ -1.3
CXCR4-202ENST00000409817 FAM227AF5H4B4 570 aa6.95□□□□□ -1.3
CXCR4-202ENST00000409817 I3L1I5 382 aaPredicted RBP6.95□□□□□ -1.3
CXCR4-202ENST00000409817 BCAT2O15382 392 aaPredicted RBP6.95□□□□□ -1.3
CXCR4-202ENST00000409817 PRAMEF2O60811 474 aa6.95□□□□□ -1.3
CXCR4-202ENST00000409817 TIAF1O95411 115 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms