RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeast

Gene snR19, Length 568 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR19	snR19	EAF1	Q06337	982 aa		6.01	□□□□□ -1.45
snR19	snR19	ATG13	Q06628	738 aa		6.01	□□□□□ -1.45
snR19	snR19	FLC1	Q08967	793 aa		6.01	□□□□□ -1.45
snR19	snR19	HSP60	P19882	572 aa	Known RBP	6	□□□□□ -1.45
snR19	snR19	YKL091C	P33324	310 aa	Known RBP	6	□□□□□ -1.45
snR19	snR19	HSP78	P33416	811 aa		6	□□□□□ -1.45
snR19	snR19	ALR2	P43553	858 aa		6	□□□□□ -1.45
snR19	snR19	YGR125W	P53273	1036 aa		6	□□□□□ -1.45
snR19	snR19	SQS1	P53866	767 aa	Known RBP	6	□□□□□ -1.45
snR19	snR19	HRQ1	Q05549	1077 aa		6	□□□□□ -1.45
snR19	snR19	YDR306C	Q06640	478 aa		6	□□□□□ -1.45
snR19	snR19	YOR131C	Q12486	218 aa		6	□□□□□ -1.45
snR19	snR19	CIT1	P00890	479 aa		5.99	□□□□□ -1.45
snR19	snR19	ARE1	P25628	610 aa		5.99	□□□□□ -1.45
snR19	snR19	CDC12	P32468	407 aa	Known RBP	5.99	□□□□□ -1.45
snR19	snR19	HBS1	P32769	611 aa	Known RBP	5.99	□□□□□ -1.45
snR19	snR19	RRT14	P40470	206 aa		5.99	□□□□□ -1.45
snR19	snR19	SEC26	P41810	973 aa	Known RBP	5.99	□□□□□ -1.45
snR19	snR19	YRB30	P53107	440 aa	Predicted RBP	5.99	□□□□□ -1.45
snR19	snR19	SRP1	Q02821	542 aa	Known RBP	5.99	□□□□□ -1.45
snR19	snR19	RPN4	Q03465	531 aa		5.99	□□□□□ -1.45
snR19	snR19	UBX5	Q06682	500 aa		5.99	□□□□□ -1.45
snR19	snR19	SVS1	Q12254	260 aa		5.99	□□□□□ -1.45
snR19	snR19	ADE6	P38972	1358 aa	Known RBP	5.98	□□□□□ -1.45
snR19	snR19	ACE2	P21192	770 aa		5.98	□□□□□ -1.45
snR19	snR19	MAC1	P35192	417 aa		5.98	□□□□□ -1.45
snR19	snR19	SAH1	P39954	449 aa	Known RBP	5.98	□□□□□ -1.45
snR19	snR19	FOL2	P51601	243 aa	Known RBP	5.98	□□□□□ -1.45
snR19	snR19	MTC3	P53077	123 aa		5.98	□□□□□ -1.45
snR19	snR19	TPO2	P53283	614 aa		5.98	□□□□□ -1.45
snR19	snR19	TAF8	Q03750	510 aa		5.98	□□□□□ -1.45
snR19	snR19	SLM3	Q12093	417 aa		5.98	□□□□□ -1.45
snR19	snR19	YLL058W	Q12198	575 aa		5.98	□□□□□ -1.45
snR19	snR19	GLT1	Q12680	2145 aa	Known RBP	5.98	□□□□□ -1.45
snR19	snR19	RTC1	Q08281	1341 aa		5.98	□□□□□ -1.45
snR19	snR19	APC1	P53886	1748 aa		5.97	□□□□□ -1.45
snR19	snR19	YEF3	P16521	1044 aa	Known RBP	5.97	□□□□□ -1.45
snR19	snR19	AAR2	P32357	355 aa	Predicted RBP	5.97	□□□□□ -1.45
snR19	snR19	ABZ1	P37254	787 aa	Predicted RBP	5.97	□□□□□ -1.45
snR19	snR19	PAF1	P38351	445 aa		5.97	□□□□□ -1.45
snR19	snR19	RSP5	P39940	809 aa	Known RBP	5.97	□□□□□ -1.45
snR19	snR19	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.97	□□□□□ -1.45	not detected
snR19	snR19	FPR4	Q06205	392 aa	Predicted RBP	5.97	□□□□□ -1.45
snR19	snR19	MDM38	Q08179	573 aa		5.97	□□□□□ -1.45
snR19	snR19	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.96	□□□□□ -1.46	not detected
snR19	snR19	RFC5	P38251	354 aa		5.96	□□□□□ -1.46
snR19	snR19	CCC2	P38995	1004 aa		5.96	□□□□□ -1.46
snR19	snR19	ENV11	P53246	860 aa		5.96	□□□□□ -1.46
snR19	snR19	PPM2	Q08282	695 aa		5.96	□□□□□ -1.46
snR19	snR19	RIM15	P43565	1770 aa		5.95	□□□□□ -1.46
snR19	snR19	ENP1	P38333	483 aa	Known RBP	5.95	□□□□□ -1.46
snR19	snR19	GGA2	P38817	585 aa	Known RBP	5.95	□□□□□ -1.46
snR19	snR19	SIT1	P39980	628 aa		5.95	□□□□□ -1.46
snR19	snR19	BUD6	P41697	788 aa		5.95	□□□□□ -1.46
snR19	snR19	ADE8	P04161	214 aa		5.94	□□□□□ -1.46
snR19	snR19	GAL11	P19659	1081 aa		5.94	□□□□□ -1.46
snR19	snR19	CDC11	P32458	415 aa		5.94	□□□□□ -1.46
snR19	snR19	SCT1	P32784	759 aa		5.94	□□□□□ -1.46
snR19	snR19	HUL4	P40985	892 aa		5.94	□□□□□ -1.46
snR19	snR19	HFM1	P51979	1187 aa		5.94	□□□□□ -1.46
snR19	snR19	HBN1	Q96VH4	193 aa		5.94	□□□□□ -1.46
snR19	snR19	IKI3	Q06706	1349 aa	Known RBP	5.94	□□□□□ -1.46
snR19	snR19	CAN1	P04817	590 aa		5.93	□□□□□ -1.46
snR19	snR19	AFR1	P33304	620 aa		5.93	□□□□□ -1.46
snR19	snR19	YRO2	P38079	344 aa		5.93	□□□□□ -1.46
snR19	snR19	POL12	P38121	705 aa	Predicted RBP	5.93	□□□□□ -1.46
snR19	snR19	GIC1	P38785	314 aa		5.93	□□□□□ -1.46
snR19	snR19	CHZ1	P40019	153 aa	Predicted RBP	5.93	□□□□□ -1.46
snR19	snR19	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.93	□□□□□ -1.46	not detected
snR19	snR19	SRT1	Q03175	343 aa		5.93	□□□□□ -1.46
snR19	snR19	RSM24	Q03976	319 aa		5.93	□□□□□ -1.46
snR19	snR19	RIB2	Q12362	591 aa	Known RBP	5.93	□□□□□ -1.46
snR19	snR19	DFG16	Q99234	619 aa		5.93	□□□□□ -1.46
snR19	snR19	CIT2	P08679	460 aa		5.92	□□□□□ -1.46
snR19	snR19	KIN2	P13186	1147 aa	Known RBP	5.92	□□□□□ -1.46
snR19	snR19	APL1	P27351	700 aa		5.92	□□□□□ -1.46
snR19	snR19	FUN30	P31380	1131 aa		5.92	□□□□□ -1.46
snR19	snR19	LRG1	P35688	1017 aa		5.92	□□□□□ -1.46
snR19	snR19	YBR284W	P38150	797 aa		5.92	□□□□□ -1.46
snR19	snR19	ETP1	P38748	585 aa	Known RBP	5.92	□□□□□ -1.46
snR19	snR19	NPP2	P39997	493 aa		5.92	□□□□□ -1.46
snR19	snR19	YDL124W	Q07551	312 aa	Known RBP	5.92	□□□□□ -1.46
snR19	snR19	OSW2	Q12202	724 aa		5.92	□□□□□ -1.46
snR19	snR19	YDL177C	Q12257	170 aa		5.92	□□□□□ -1.46
snR19	snR19	RPS24A	P0CX31	135 aa	Known RBP	5.91	□□□□□ -1.46
snR19	snR19	RPS24B	P0CX32	135 aa	Known RBP	5.91	□□□□□ -1.46
snR19	snR19	NPP1	P25353	742 aa		5.91	□□□□□ -1.46
snR19	snR19	YKR078W	P36158	585 aa	Known RBP	5.91	□□□□□ -1.46
snR19	snR19	OSW7	P43611	510 aa		5.91	□□□□□ -1.46
snR19	snR19	GYP7	P48365	746 aa		5.91	□□□□□ -1.46
snR19	snR19	RTA1	P53047	317 aa		5.91	□□□□□ -1.46
snR19	snR19	KIN4	Q01919	800 aa		5.91	□□□□□ -1.46
snR19	snR19	BUL2	Q03758	920 aa	Known RBP	5.91	□□□□□ -1.46
snR19	snR19	LCD1	Q04377	747 aa		5.91	□□□□□ -1.46
snR19	snR19	XYL2	Q07993	356 aa		5.91	□□□□□ -1.46
snR19	snR19	YPR071W	Q12346	211 aa		5.91	□□□□□ -1.46
snR19	snR19	SPT7	P35177	1332 aa		5.91	□□□□□ -1.46
snR19	snR19	TOP3	P13099	656 aa		5.9	□□□□□ -1.46
snR19	snR19	PET10	P36139	283 aa		5.9	□□□□□ -1.46
snR19	snR19	BET3	P36149	193 aa		5.9	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms